Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  204 bits (518), Expect = 1e-57
 Identities = 105/203 (51%), Positives = 148/203 (72%), Gaps = 3/203 (1%)

Query: 5   VLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSGL 64
           VL+VDDHPL+RRGI QL++ + +F +  EAGSG +A++   + +PD++LLDLNMKGM+GL
Sbjct: 7   VLVVDDHPLLRRGICQLITSDSDFTLFGEAGSGLDALSAIAENEPDIVLLDLNMKGMTGL 66

Query: 65  DTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGEK 124
           DTL ALR +   + +VILTVSD+  D+  LV+AGADGYLLKDTEPD L+  LK AMQG +
Sbjct: 67  DTLNALRQEGVTSRIVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLEKLKNAMQGHR 126

Query: 125 AFSESVERYLLNREHTSNP---FEALTEREMQIMSEVAKGYRNRQIADRLFISESTVKVH 181
             SESVE ++   +  ++     + LT RE+QI+ ++A+G  NR I+++L ISE TVKVH
Sbjct: 127 VISESVEDFIYELKDGADEQAWIDNLTPRELQILEQLAEGKSNRVISEQLHISEGTVKVH 186

Query: 182 MKSLLKKLDVPSRTAATILYLER 204
           +K+LL+K +  SRT   + YL +
Sbjct: 187 VKNLLRKANAKSRTEMAVRYLNQ 209