Pairwise Alignments

Query, 208 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 225 a.a., two component LuxR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  111 bits (277), Expect = 1e-29
 Identities = 67/203 (33%), Positives = 112/203 (55%), Gaps = 3/203 (1%)

Query: 4   RVLLVDDHPLMRRGINQLLSFEEEFEVVAEAGSGAEAIALAHDLQPDLILLDLNMKGMSG 63
           RV LV+D  L+R+GI  L++  +  EV  +A +G EA+        D++L D+ M  + G
Sbjct: 19  RVGLVEDQQLVRQGIASLIAISQHIEVSWQAENGQEALKRLQTDAVDVLLSDIRMPVLDG 78

Query: 64  LDTLTALRTDECDAYVVILTVSDSAADIEALVKAGADGYLLKDTEPDQLVALLKQAMQGE 123
           +  L  LR  +    V++LT  D +      ++AGA+G+LLKD   D+L+  ++   QG 
Sbjct: 79  ISLLKQLRAAQNSIPVIMLTTFDDSELFLNSLQAGANGFLLKDVSLDKLLEAIETVAQGG 138

Query: 124 KAFSESVERYLLNREHTSN---PFEALTEREMQIMSEVAKGYRNRQIADRLFISESTVKV 180
                SV   +     T+      + L+ERE +I+  +A G+ N++IA+ +F++E TVK 
Sbjct: 139 HLIEPSVLEQMQQSSATAQSGPTHDLLSEREREILGFMAGGFSNKEIANAVFLAEGTVKN 198

Query: 181 HMKSLLKKLDVPSRTAATILYLE 203
           H+ ++L KLD   RT A +  L+
Sbjct: 199 HVSTILAKLDCRDRTQAVLKGLQ 221