Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  106 bits (265), Expect = 7e-28
 Identities = 90/332 (27%), Positives = 159/332 (47%), Gaps = 12/332 (3%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T KDVA LAG+S +TVS V      VSE  + KV  A   L+Y P+A ARSL    +  I
Sbjct: 3   TIKDVAALAGISYTTVSHVLNNTRPVSEPVRLKVEAAIAQLDYVPSAVARSLKAKTTSTI 62

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVD-EQDNHSIPNIFQYRVDGVIAA 134
           GL+ P+   P   +  + I    ++ G+  +L     + E+    +  + + RVDG+I +
Sbjct: 63  GLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGLIVS 122

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
           S   +  +     E   P+V   R ++G  +  V  D+ +    A + L   G ++   +
Sbjct: 123 SVGGDAGIAGGLAEVRTPLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRAIACI 182

Query: 195 TGEVPTFTNDERQQGFCSEFKSLTGFTPPV-----VKATYDYTGSLDTIRRLIADSSRPA 249
            G   +   + R  G+    ++L   + PV     + + +  +   +   +L+A +  P 
Sbjct: 183 GGPFHSTVAEMRLAGY---RRALQQASVPVRAEWALHSEFTSSAGHEAACQLLA-AHPPT 238

Query: 250 AIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARE 309
           AIF   D +A+ V+  A  E  +R+P D+ VIGFD+I  + ++   LTT  Q   +L   
Sbjct: 239 AIFAGNDVIAIGVLRAAA-ERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGET 297

Query: 310 SVKIIVDQITTRNQ-SLVKLMVPTKLIQRKST 340
           + ++++ +I T +     K +V   ++ R+ST
Sbjct: 298 AAEMLLSRIATPHALPAEKRLVTPSVVVREST 329