Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  115 bits (287), Expect = 2e-30
 Identities = 92/327 (28%), Positives = 155/327 (47%), Gaps = 6/327 (1%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           VT KDVA  AG+S++ VSR      S+  +T Q++  A K L+YR N+ AR L+   S+ 
Sbjct: 5   VTLKDVANHAGLSKAAVSRYLNRSISLPPETAQRIDLAIKALDYRGNSLARRLSKGGSET 64

Query: 75  IGLVFPDADYPIHMKTLQLISSELQQVGYSAVL-IPWQVDEQDNHSIPNIFQYRVDGVIA 133
           IGLV PD   P   +       E    GY+ VL +   + E+++  +  +    VDG++ 
Sbjct: 65  IGLVLPDIANPFFAELADAAEEEASAHGYNLVLCVTRNLLERESTFVRWLDSRNVDGLLL 124

Query: 134 AS-ATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAV 192
            S    + TL  +   +   I+     V GT    V +DN++ GR A   L + G +   
Sbjct: 125 VSNRPDDGTLASQLMSYR-NIILLDEDVPGTSQPKVFADNHQGGRLATDYLIRHGHRRIA 183

Query: 193 YLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYTGSLDTI--RRLIADSSRPAA 250
           +++G     +  ER  G+       +    P      DY+     I   +L+     P A
Sbjct: 184 HVSGPSALMSARERYAGYREALALASIAEVPEYLCFGDYSREFGRIATAQLLTLPDPPEA 243

Query: 251 IFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARES 310
           IF A+D +A+ V+D+ R E ++ +P  + ++GFD+      L+  L T  Q  + L R  
Sbjct: 244 IFAASDFIALGVLDVLR-ERTISVPGAMSLVGFDDAVYASLLTPPLCTIRQSSRELGRLG 302

Query: 311 VKIIVDQITTRNQSLVKLMVPTKLIQR 337
           V  ++ ++T  + +   + VP +L+ R
Sbjct: 303 VAQLLQRMTGGDCAQDIVRVPVELVCR 329