Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  158 bits (400), Expect = 2e-43
 Identities = 101/310 (32%), Positives = 167/310 (53%), Gaps = 5/310 (1%)

Query: 11  EKATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTN 70
           +K  V++++VA+ AGVS+S VSR F PG+SVS +T+++V EAA+ L Y  N  AR L  N
Sbjct: 3   QKPFVSAQEVAERAGVSRSAVSRTFTPGASVSPETRRRVVEAAEALGYHVNHLARGLMRN 62

Query: 71  ESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPW-QVDEQDNHSIPNIFQYRVD 129
           ES ++ L+  +   P     ++ ++ +LQ  G  A+LI   + D+  + ++    +YR D
Sbjct: 63  ESGIVCLIVSEMSTPYRANLIRAMTQQLQNAGKVAMLINTDRSDDSVDLALRQAIRYRAD 122

Query: 130 GVIAASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQ 189
             I  S   ++++ + C +    +V   R  +      +  D+ EA  +      +AG +
Sbjct: 123 ASIILSGMPDRSITQLCLKNGQRLVLINRDDDQQGPLRINLDDAEAAGRVVTAFVRAGCR 182

Query: 190 SAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVK--ATYDYTGSLDTIRRLIADSSR 247
              +   +  T +   R+ GF +  +++    P +V+     +Y       +RL+    R
Sbjct: 183 RLAFANSQAGTPSLMAREHGFVATARAMG--LPVLVERHGPTNYESGRVLAQRLLTLGER 240

Query: 248 PAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLA 307
           P A+FCATD LA   MD AR +F + IPD + V GFD+I Q  W SY LTTFAQ   R+A
Sbjct: 241 PDAVFCATDLLACGFMDAARHQFRVSIPDLLCVAGFDDIEQAAWSSYDLTTFAQPVDRIA 300

Query: 308 RESVKIIVDQ 317
           +E+V  +V++
Sbjct: 301 QEAVAWLVNE 310