Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ribose operon transcriptional repressor RbsR from Rahnella sp. WP5

 Score =  129 bits (325), Expect = 8e-35
 Identities = 97/333 (29%), Positives = 167/333 (50%), Gaps = 15/333 (4%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T KDVA+LAGVS STVS V      VSE   +KV  A + LNY P+A ARSL  N+++ +
Sbjct: 3   TMKDVARLAGVSTSTVSHVINKNRFVSESIAEKVNAAVEQLNYAPSALARSLKLNQTRTL 62

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVD-EQDNHSIPNIFQYRVDGVIAA 134
           G++   +  P + + ++ +     + GYS +L     D E+ N S+  + Q RVDG++  
Sbjct: 63  GMLLTASSNPFYSEVVRGVERSCYERGYSLILCNTDNDAERMNRSLETLLQKRVDGLLIM 122

Query: 135 SATFNKTLYEECEEF-NIPIVQYA-RVVEGTKSSYVISDN-YEAGRQAAQLLHQAGAQSA 191
               ++   +    + ++PIV       +G     +I DN    G  A + L + G    
Sbjct: 123 CTENHRPSKDVISRYPSLPIVMMDWSPFDGAID--IIQDNALLGGEMATEFLIRQGYHRI 180

Query: 192 VYLTGEVPTFTNDERQQGF-----CSEFKSLTGFTPPVVKATYDYTGSLDTIRRLIADSS 246
             +TG +   T  ER  G+      +  K L G+    V + +++ G L  +++L+A   
Sbjct: 181 ACITGPLDKTTAQERLSGYRQAMEKAGLKILPGYE---VCSDFEFEGGLAAMQQLLALPE 237

Query: 247 RPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRL 306
            P A+F + D +A+ V   A ++  LR+PDD+ V+G+D+I   +++   LTT  Q    L
Sbjct: 238 PPHAVFASNDAMAVGVYQ-ALYQRGLRVPDDVAVMGYDDIQLAQYMMPPLTTIHQPKDSL 296

Query: 307 ARESVKIIVDQITTRNQSLVKLMVPTKLIQRKS 339
              +V  ++ ++         L++  +L+ R+S
Sbjct: 297 GELAVDALLHRLQDPASEPQILVLTPELVVRQS 329