Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., putative transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

 Score =  110 bits (274), Expect = 7e-29
 Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 8/329 (2%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T  DVAK AGVS +TVSR       V E T+ +V +A + L Y PN  AR +    S  I
Sbjct: 9   TLNDVAKAAGVSTATVSRCLNSPDRVVETTRHRVMQAVESLGYTPNFAARVMAAKRSFTI 68

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVD-EQDNHSIPNIFQYRVDGVIAA 134
           G + P  D  I  + LQ    +L++ GY+ ++       E +   I  +     DG++  
Sbjct: 69  GAIIPTMDNAIFARGLQAFQDQLREDGYTLLVSSSAYSPEVEKEQIRALVARGADGLLLI 128

Query: 135 SATFNKTLYEECEEFNIPI-VQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVY 193
                + +Y+  E+  +P+ V ++   E  + S   S N  A R  A  +  AG +    
Sbjct: 129 GHEREEQIYQYLEKHRVPVLVAWSYAPERLQPSVGFS-NKGAMRDLAHTVVDAGHRHIAM 187

Query: 194 LTGEVPTFTNDERQQGFCSEFKSLTGFTP---PVVKATYDYTGSLDTIRRLIADSSRPAA 250
           ++G +      + +     +     G  P    +++A Y+          L++ + RP  
Sbjct: 188 ISGILQGNDRAQNRVSGVRDAMRSRGLDPAALTLIEAPYEIEKGASAFAELMSRAPRPTV 247

Query: 251 IFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARES 310
           + C  D LA   +  AR    + +PDD+ + GFD+I   E +S  LTT     + + R++
Sbjct: 248 VMCGNDVLAAGALREARSR-GIAVPDDVSITGFDDIELAEIVSPALTTVHVPHREMGRKA 306

Query: 311 VKIIVDQITTRNQSLVKLMVPTKLIQRKS 339
            + ++  +  R++    + + T L+ R+S
Sbjct: 307 AQELIAIVEGRSEG-QSVCISTTLVTRQS 334