Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

 Score =  157 bits (398), Expect = 3e-43
 Identities = 103/331 (31%), Positives = 167/331 (50%), Gaps = 16/331 (4%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           VT KDVA+ A VS+S VSR F  G+SVSEK ++KV +AA+ L Y PNA A SLTT  +KL
Sbjct: 3   VTLKDVAERAQVSRSAVSRTFTDGASVSEKMRRKVEKAAQELGYSPNALASSLTTGRTKL 62

Query: 75  IGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIFQYRVDGVIAA 134
           IGLV  +   PI ++     +  LQ  G   +L+    +    +S+  + QY VDGV+ A
Sbjct: 63  IGLVSNNFHNPIFLEVFDRFTRRLQDRGLRPLLVNLSDETDPENSVRMLRQYSVDGVVVA 122

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVIS-DNYEAGRQAAQLLHQAGAQSAVY 193
           S+T      +   +  +P+V        T   +V+  DN E GR AA+ L   G     +
Sbjct: 123 SSTLPPGFAKAFRDAGVPVVHSFGRSSSTPQVHVVGIDNVECGRMAARTLVARGYNKVAF 182

Query: 194 LTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDY-------TGSLDTIRRLIADSS 246
           + G     +  +R +GF SE ++      P + AT+ +        G  + +R L  D +
Sbjct: 183 MGGPQSATSTQDRCKGFTSEMEA-----HPEITATHSFAEDYSFEAGRREMLRLLQDDPA 237

Query: 247 RPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRL 306
              A FC  D L++  +   R E  L++P D+ VIG +++    W +  LTT  Q  +++
Sbjct: 238 E--AYFCGDDVLSIGALSAIR-EQGLQVPQDVGVIGLNDMEMARWENIDLTTIHQPIEQI 294

Query: 307 ARESVKIIVDQITTRNQSLVKLMVPTKLIQR 337
              S++++   +   ++     + P  +++R
Sbjct: 295 VNSSIELVAAMLDEPDRYPEARIFPCHVVER 325