Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., transcriptional regulator, lacI family from Phaeobacter inhibens DSM 17395

 Score =  204 bits (519), Expect = 3e-57
 Identities = 120/333 (36%), Positives = 182/333 (54%), Gaps = 12/333 (3%)

Query: 13  ATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNES 72
           A +TS DVA+LAGVSQS VSRVF PG+S S+KT  KV  AA+ L YRPN+ AR++ +  S
Sbjct: 4   AKITSADVARLAGVSQSAVSRVFTPGASASKKTVDKVRAAAESLGYRPNSLARAMVSGRS 63

Query: 73  KLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHSIPNIFQ----YRV 128
           ++IGLV    +   + + L+ +S+ LQ+ GY  ++    +     HSI N+ +    Y+V
Sbjct: 64  RIIGLVVAYLENHFYPEALEKLSNALQERGYHVLMF---MAPNTAHSIDNVIEEILDYQV 120

Query: 129 DGVIAASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGA 188
           DG+IAAS   +  L + C    +P+V + R  +    S V SDNY  GR+ A+ L  AG 
Sbjct: 121 DGIIAASVAMSSELSDRCRAAGVPMVLFNRSQDDPSMSAVTSDNYAGGRKVAEFLLAAGH 180

Query: 189 QSAVYLTGEVPTFTNDERQQGFCSEF--KSLTGFTPPVVKATYDYTGSLDTIRRLIADSS 246
           +   Y+ G     T  +R+ GFC       LT     V    +    + +  R++     
Sbjct: 181 RKIGYIAGWEGASTQRDRETGFCERLAEDGLTLHARGV--GNFKMETAAEATRQMFT-GD 237

Query: 247 RPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRL 306
           RP A+F   D++A AVMD+ R E  L +P D+ V+G+D++P   W +Y +TT  Q   R+
Sbjct: 238 RPDAVFVGNDHMAFAVMDVLRSELGLCVPGDVSVVGYDDVPTAAWPAYDMTTVRQPANRM 297

Query: 307 ARESVKIIVDQITTRNQSLVKLMVPTKLIQRKS 339
              +V I++D+I    Q   ++ +   LI R S
Sbjct: 298 VSATVDILLDEINGAPQRPRRIAIDGPLIVRGS 330