Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., LacI family DNA-binding transcriptional regulator from Pantoea sp. MT58

 Score =  157 bits (397), Expect = 4e-43
 Identities = 102/311 (32%), Positives = 161/311 (51%), Gaps = 3/311 (0%)

Query: 8   MHSEKATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSL 67
           M   KA V+++DVA  AGVS+S VSR F PG+SVSE T+Q+V +AA+ L Y  N  AR L
Sbjct: 1   MQQLKAVVSAQDVADRAGVSRSAVSRTFTPGASVSEATRQRVMKAAEELGYHVNHLARGL 60

Query: 68  TTNESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPW-QVDEQDNHSIPNIFQY 126
             N S ++ L+  + D P     ++ ++  LQ+ G  A+LI   + D + + ++     +
Sbjct: 61  VRNRSGIVCLIASEVDTPYRASLVRWMTQYLQEAGKVAMLINTDRSDARVSAALQQAINF 120

Query: 127 RVDGVIAASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQA 186
           R D  I  S   +  +   C +    +V   R      +  +  D+  A   A     +A
Sbjct: 121 RADASIILSGMPDSGITRLCYKHGQHLVLINRDESLPGTLNINLDSGPAAEMAVNAFVRA 180

Query: 187 GAQSAVYLTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVK-ATYDYTGSLDTIRRLIADS 245
           G     ++     T +  +R+  F +  +   G    V +  +  Y       +RL+   
Sbjct: 181 GCNRIAFVNSLAGTPSLLKREADFLAAAQK-AGVAVQVERFGSTSYESGQILAQRLLTRK 239

Query: 246 SRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKR 305
            RP A++CATD LA   MD AR  F+LRIP+D+ ++G DNIPQ+ W SY LTTFAQ  ++
Sbjct: 240 VRPDAVYCATDLLACGFMDEARHRFALRIPEDLCIMGHDNIPQSGWSSYNLTTFAQPVEQ 299

Query: 306 LARESVKIIVD 316
            AR+++  +V+
Sbjct: 300 FARDAIAWLVE 310