Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., DNA-binding transcriptional regulator CytR from Klebsiella michiganensis M5al

 Score =  120 bits (300), Expect = 7e-32
 Identities = 89/330 (26%), Positives = 154/330 (46%), Gaps = 4/330 (1%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T KDVA+ A VS +TVSR  +    VS+ T+ +V +AA  + Y P +  R++  NES+ I
Sbjct: 11  TMKDVAQKANVSTATVSRALMNPDKVSQSTRNRVEQAALEVGYLPQSLGRNMKRNESRTI 70

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPW-QVDEQDNHSIPNIFQYRVDGVIAA 134
            ++ PD   P   + ++ I     +  Y  ++      + Q+   I  I   ++DG++  
Sbjct: 71  LVIVPDICDPFFSEIIRGIEVTAAEQEYLVLIGDCAHQNRQEKTFIDLIITKQIDGMLLL 130

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
            +        E +    P+V         +   V  DN  A   A   LH+ G +    +
Sbjct: 131 GSRLPFDAGVEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFNAVNYLHELGHRRIGCI 190

Query: 195 TGEVPTFTNDERQQGFCSEFK--SLTGFTPPVVKATYDYTGSLDTIRRLIADSSRPAAIF 252
            G         R QG+    +   +T     + +  + Y      + +L+A    P AIF
Sbjct: 191 AGPEEMPLCHYRLQGYVQALRRSGITVDPHYIARGNFTYEAGASALEQLLALPVPPTAIF 250

Query: 253 CATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESVK 312
           C +D +A+  + +A+    L++P+D+ +IGFDNI  +E+    LTT AQ    + RE++ 
Sbjct: 251 CHSDIMALGALSLAK-RRGLKVPEDLSIIGFDNISLSEFCDPPLTTVAQPRFDIGREAML 309

Query: 313 IIVDQITTRNQSLVKLMVPTKLIQRKSTLK 342
           +++DQ+   N S    ++  +LI R ST K
Sbjct: 310 LLLDQLHGHNVSSGSRLLDCELIVRGSTRK 339