Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., transcriptional regulator RbsR from Klebsiella michiganensis M5al

 Score =  125 bits (315), Expect = 1e-33
 Identities = 88/327 (26%), Positives = 160/327 (48%), Gaps = 7/327 (2%)

Query: 18  KDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLIGL 77
           KDVA++AGVS STVS V      VSE    KV  A K LNY P+A ARSL  N+++ IG+
Sbjct: 2   KDVARIAGVSTSTVSHVINKDRFVSEAITAKVDAAIKSLNYAPSALARSLKLNQTRTIGM 61

Query: 78  VFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQD-NHSIPNIFQYRVDGVIAASA 136
           +   +  P + + ++ +     + GYS VL   + DEQ  N ++  + Q RVDG++    
Sbjct: 62  LITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQRMNRNLETLMQKRVDGLLLLCT 121

Query: 137 TFNKTLYEECEEF-NIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYLT 195
             ++   E  + + ++P V          S  +  ++   G  A + L   G      + 
Sbjct: 122 ETHQPSPEIMQRYPSVPTVMMDWAPFDGDSDLIQDNSLLGGDMATKYLIDQGYTRIACIA 181

Query: 196 GEVPTFTNDERQQGFCSEFKSLTGFTPP---VVKATYDYTGSLDTIRRLIADSSRPAAIF 252
           G +       R +G+ +   +  G T P   V+ + +++ G    +++L+  S+ P A+F
Sbjct: 182 GPLDKTPARLRLEGYQAAM-ARAGLTVPEGYVISSDFEFGGGFSAMQKLLTLSALPQAVF 240

Query: 253 CATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESVK 312
              D +A+     A ++  LRIP D+ ++G+D+I    +++  LTT  Q    L   ++ 
Sbjct: 241 IGNDAMAVGAYQ-ALYQGGLRIPQDMALVGYDDIELARYMTPPLTTIHQPKDELGELAID 299

Query: 313 IIVDQITTRNQSLVKLMVPTKLIQRKS 339
           +++ ++    Q   ++ +  +L+ R S
Sbjct: 300 VLIHRMADPGQKQQRVQLTPELVVRGS 326