Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., transcriptional regulator, LacI family (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  208 bits (529), Expect = 2e-58
 Identities = 120/326 (36%), Positives = 181/326 (55%), Gaps = 1/326 (0%)

Query: 15  VTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKL 74
           VTS DVA++AGVSQS VSRVF PG+SVS KT +KV  AA+ L YRPN  ARSL T +SK+
Sbjct: 6   VTSLDVARVAGVSQSAVSRVFTPGASVSPKTAKKVRAAAEELGYRPNVLARSLITGQSKI 65

Query: 75  IGLVFPDADYPIHMKTLQLISSELQQVGYSA-VLIPWQVDEQDNHSIPNIFQYRVDGVIA 133
           IGLV    D   +   L+ +S  LQ  GY   V +      Q +  I  +  Y+VDG+I 
Sbjct: 66  IGLVVAYLDNQFYPDALERLSMALQDRGYHILVFMASGTGAQVDRVIGELLDYQVDGIIT 125

Query: 134 ASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVY 193
           AS   +  L + C    IP+V + R  +  + S V SDN+   R+ A+ L   G +   +
Sbjct: 126 ASVGMSDELTKRCNSAGIPVVMFNRGQDDARLSSVTSDNFTGAREIARFLAAGGHERIAH 185

Query: 194 LTGEVPTFTNDERQQGFCSEFKSLTGFTPPVVKATYDYTGSLDTIRRLIADSSRPAAIFC 253
           +TG   + T  +R+ GF +  +        +V   Y    +      L A ++ P AIF 
Sbjct: 186 ITGWTGSSTGRDRKAGFLAGLEDAGLAAHGIVDGHYRRAEAQAAAHALFAGAAPPDAIFV 245

Query: 254 ATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESVKI 313
             D++A AVMD  R E  +RIP+D+ ++G+D++P  +W +Y+LTT+ Q   R+   +V++
Sbjct: 246 GNDHMAFAVMDTVRGELGVRIPEDVSIVGYDDVPLADWGAYRLTTWRQPSNRMVAATVEL 305

Query: 314 IVDQITTRNQSLVKLMVPTKLIQRKS 339
           ++  I   +++  KL +  +LI R S
Sbjct: 306 LLGLIDDADRAPEKLEIAGRLIVRDS 331