Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 346 a.a., LacI family DNA-binding transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  122 bits (305), Expect = 2e-32
 Identities = 89/335 (26%), Positives = 155/335 (46%), Gaps = 11/335 (3%)

Query: 16  TSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSLTTNESKLI 75
           T KDVA LAGVS +TVS V      V+ +T+++V EA +   Y P+A ARSL    ++ I
Sbjct: 3   TIKDVAALAGVSFTTVSHVINNTRPVNAETRKRVEEAIRATRYVPSAVARSLKHRTTRTI 62

Query: 76  GLVFPDADYPIHMKTLQLISSELQQVGYSAVLIPWQVDEQDNHS-IPNIFQYRVDGVIAA 134
           G++ P A  P   +  + I       GYS +L     D +     +  + + RVDG+I +
Sbjct: 63  GVLVPTATNPYFAELARGIEDVCAAAGYSVILCNSDDDPRKQRDYLRVLMEKRVDGIIVS 122

Query: 135 SATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLHQAGAQSAVYL 194
           SA  +  L E   E  +PIV   R  EG ++  V  D+ E    A + L + G +    +
Sbjct: 123 SAGPDTALVEALGESALPIVMVDRPTEGIQADQVQVDHEEGAYMATKHLLELGHRRIACI 182

Query: 195 TGEVPTFTNDERQQGFCSEFK--SLTGFTPPVVKATYDYTGSLDTIRRLIADSSRPAAIF 252
           +G        ER  GF    +   +   +  + +  +   G     R+L+ +   P AIF
Sbjct: 183 SGPSALSVTAERLAGFHRALREAGVPEASARIAEGDFTSPGGYRAARQLLTEGEMPTAIF 242

Query: 253 CATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQDFKRLARESVK 312
              D + +  +  A  E  + +P  + V+GFD+I  + ++   L+T  Q  ++L   + +
Sbjct: 243 AGNDLMGIGALRAAA-ELGIPVPKALSVMGFDDIELSRYVYPALSTVGQSIRQLGETTAQ 301

Query: 313 IIVDQI-------TTRNQSLVKLMVPTKLIQRKST 340
            +++ +               ++++P +L  R+ST
Sbjct: 302 TLLEHLGDNALRHPVEEHRARRIVLPPRLSLREST 336