Pairwise Alignments

Query, 343 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., LacI family transcriptional regulator (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  125 bits (315), Expect = 1e-33
 Identities = 92/340 (27%), Positives = 166/340 (48%), Gaps = 8/340 (2%)

Query: 8   MHSEKATVTSKDVAKLAGVSQSTVSRVFVPGSSVSEKTKQKVFEAAKVLNYRPNAFARSL 67
           M + K T + KD+A+  GVS  TVSR       +S +   K  + AK +NYRPN FA SL
Sbjct: 1   MENRKHT-SLKDLAQALGVSIPTVSRALKDSPEISRELCAKAKKLAKEMNYRPNPFAMSL 59

Query: 68  TTNESKLIGLVFPDADYPIHMKTLQLISSELQQVGYSAVL-IPWQVDEQDNHSIPNIFQY 126
             N  ++IG++ PD         L  I +     GY  ++    +  E +  +I N+   
Sbjct: 60  RKNAPRIIGVIVPDIVTHFFASILNGIENMAIDNGYFVIITTSHESFEHEKRNIENLVNM 119

Query: 127 RVDGVIA--ASATFNKTLYEECEEFNIPIVQYARVVEGTKSSYVISDNYEAGRQAAQLLH 184
           RV+G+IA  +  T + + +   +E N+P++ + RV    + S VI+D  ++ + A Q L 
Sbjct: 120 RVEGIIACLSQETTDFSHFAALKEINMPLILFDRVCLTDQFSSVIADGAQSAQMATQHLL 179

Query: 185 QAGAQSAVYLTGEVPTFTNDERQQGFCSEFKS--LTGFTPPVVKATYDYTGSLDTIRRLI 242
             G++   ++ G         R+ G+    +   +      VV    DY         L+
Sbjct: 180 DNGSKRVAFIGGANHLDIVKRRKHGYLEALRDNRIPIEKELVVCRKIDYEEGQIATETLL 239

Query: 243 ADSSRPAAIFCATDNLAMAVMDIARFEFSLRIPDDIQVIGFDNIPQTEWLSYQLTTFAQD 302
           +    P AI    D LA A M++ +    LRIPDDI +IG+ +     ++  +L+  +  
Sbjct: 240 SLPQPPDAILAMNDTLAFAAMEVIK-RHGLRIPDDIAIIGYTDEQHANYVEPKLSAVSHQ 298

Query: 303 FKRLARESVKIIVDQITTRNQSLVKLMVPTKLIQRKSTLK 342
             ++   + ++++DQI   ++++ ++++PT L  R+S++K
Sbjct: 299 TYKMGETACQLLIDQI-KGDRTVKQVVIPTHLQIRESSIK 337