Pairwise Alignments

Query, 338 a.a., nuclear transport factor 2 family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., protein of unknown function DUF1486 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  140 bits (353), Expect = 5e-38
 Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 17/297 (5%)

Query: 44  YPFREQQGAQAAADIFWAPLMKSMTRMQRRQDIFIAGNNEINPDEIWVMSMGHFMGLFDA 103
           +PF +  G Q        PL  +M   +RR  I +AG +  +   +W+   G ++G F A
Sbjct: 56  HPFGDVTGWQGLWQTALGPLASAMPDGERRDQIVLAGQD--HDGALWLGCAGLYLGTFIA 113

Query: 104 EYLGMRPTGKIMNIRYAEFNCVENGKISKTGLFLDLLGVMDQAGCYPLPPSTGKHFVYPG 163
             LG+ PT +++++RY EF  +  G++ +     DL  +M QAG +PL PS G+ +  P 
Sbjct: 114 PLLGIPPTRRVVHMRYHEFFRIAEGQVVEMQAVWDLPEMMMQAGVWPLSPSLGREWCVPS 173

Query: 164 PRHHNGLLFEDAAPEEGVATLDLVNQMVADLSALNDSGAMGCPPEV-LEKSWSKDMIWYG 222
           P   +GL      P  G         +VA L+A+      G P  + L++ W   M+WYG
Sbjct: 174 PAPGDGL-----GPHTGDGA-QACAHVVAMLAAMIRHPQEGGPEVMELDRFWHPRMMWYG 227

Query: 223 PCGIGASYTIPRYQQQHQLPFRNNLKDK-----KFNGHVCRFAEGNFACFFGWPNLSNTP 277
           P GIG    I  +++ HQ+PF   + D+     K   H   FAEG +    GWPN++ T 
Sbjct: 228 PAGIGTGRGIDGFRRHHQIPFLKAMPDRGQQPEKTTSHF--FAEGAYVGVTGWPNMAQTL 285

Query: 278 IG-GFLGMPGGEIRADMQVVDVYYRDGNKLSENWVLIDLPYWLKQQGLDVFERTQKI 333
            G G+LG+        ++ +D +  +   + ENWVL+DL     Q G+DV  R  ++
Sbjct: 286 TGDGWLGIAPAGQEVTLRSLDFWRLEEGLIRENWVLVDLLDLYAQIGVDVLARMAEL 342