Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., proline:sodium symporter PutP from Pseudomonas fluorescens FW300-N2E3

 Score =  110 bits (274), Expect = 2e-28
 Identities = 112/495 (22%), Positives = 206/495 (41%), Gaps = 36/495 (7%)

Query: 6   TFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPG 65
           T I   IY+   +LI +   + +   +D+  GGR  G     +S  A+ +S    +G+PG
Sbjct: 7   TLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLMGLPG 66

Query: 66  WVYQSGMEA--------LNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRF---GV 114
            +Y SG+          +  +LN+   +F A    +   +     ++ +Y   RF     
Sbjct: 67  AIYMSGLSESWIAIGLIVGAYLNW---LFVAGRLRVQTEHNGDALTLPDYFSSRFEDKSG 123

Query: 115 YARTINSVVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTV 174
             R I++VV ++   I     + A A +      +S   A+      T  YT+ GG   V
Sbjct: 124 LLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGGFLAV 183

Query: 175 IWTDMLQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFDLGVDTTLWAGVVAVS 234
            WTD +Q+ ++I   +   +++LL   G+              FD+ +  T + G++++ 
Sbjct: 184 SWTDTVQATLMIFALLLTPIIVLLATGGIDTTFLAIEAQDPGNFDM-LKNTSFIGIISLM 242

Query: 235 FLHMSVYGTNQLIIQRTLATRCEKTAQKS------MLLC-----GYGAFFIYFFFALLGV 283
              +  +G   ++ +   A   +  A         M+LC       G F I +F A   V
Sbjct: 243 GWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFFGIAYFSANPAV 302

Query: 284 LLSIFYQERHFTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVATFD 343
            + +        N   V ++      NPW+ G+++SA+ AA MSTL       ++  T D
Sbjct: 303 AMPVS------ENHERVFIELAKILFNPWIAGVLLSAILAAVMSTLSCQLLVCSSALTED 356

Query: 344 LYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVGIRLG 403
            Y+ F+R+NA       V R M L  A   +I   LA + E+ +  + S      G   G
Sbjct: 357 FYKSFLRKNASQVELVWVGRAMVLAVA---LIAIALAANPENRVLGLVSYAWAGFGAAFG 413

Query: 404 SFVL-GLFSNQANEKGVIAGSIISIAAVLGARLMDIAWPWFAPIGTVFFLVSGVVISRYW 462
             VL  +        G +AG ++    V+  +  ++   +    G +F  ++ +++S+  
Sbjct: 414 PVVLISVLWKGMTRNGALAGIVVGALTVIVWKHFNLLGLYEIIPGFIFASLAILLVSKMG 473

Query: 463 GDNSIQQQAFIARQK 477
             ++   Q F A +K
Sbjct: 474 VPSAGMLQRFAAAEK 488