Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., L-proline:Na+ symporter (from data) from Pseudomonas stutzeri RCH2

 Score =  102 bits (254), Expect = 3e-26
 Identities = 116/487 (23%), Positives = 207/487 (42%), Gaps = 56/487 (11%)

Query: 2   VTYSTFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFI 61
           ++  T I   IY+   ILI +   + +    D+  GGR  G F   +S  A+ +S    +
Sbjct: 3   ISTPTLITFLIYIAAMILIGFVAYRATKNFDDYILGGRSLGSFVTALSAGASDMSGWLLM 62

Query: 62  GMPGWVYQSGMEALNIHLNYPIV-----IFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYA 116
           G+PG ++ +G+    I +   +      +F A    +   +     ++ +Y  HRF   +
Sbjct: 63  GLPGAIFVAGLSESWIAIGLIVGAWLNWLFVAGRLRVHTEHNHNALTLPDYFSHRFEDES 122

Query: 117 RTINS------VVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGG 170
           R +        +VF  + C +SGV+  A A +      +    A+      T  Y + GG
Sbjct: 123 RMLRIFSALVILVFFTIYC-ASGVV--AGARLFESSFGVPYEYALWIGAAATILYVFIGG 179

Query: 171 ISTVIWTDMLQSAVLIAGSVA--IFVLLLLQVDGVHGVSREQLNIIN-LQFDLGVDTTLW 227
              V WTD +Q+ ++I   +   +FV+L L   G  G + + +   N   FD+      +
Sbjct: 180 FLAVSWTDTVQATLMIFALLITPVFVILAL---GDMGAAMDTIATQNPAAFDM------F 230

Query: 228 AGVVAVSFLHMSVYGTNQL----IIQRTLATRCEKTAQKS-------MLLCGYGAFFIYF 276
           +G+  V+ + +  +G        I+ R +A    KT   +       M+L   GA  + F
Sbjct: 231 SGLSFVAIISLLAWGLGYFGQPHILVRFMAADSIKTIPNARRIGMAWMILTLAGAVAVGF 290

Query: 277 FFALLGVLLSIFYQERHFT---NSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTY 333
           F    G+     + E+      N   V ++ V    NPWV G+I+S + AA MSTL +  
Sbjct: 291 F----GIAYFAGHPEQAGAVSQNGERVFMELVKILFNPWVAGIILSGVLAAVMSTLSAQL 346

Query: 334 NSMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASL 393
              ++  T D Y+  +R++A       V R M L+ A   +I   +A + ES +  + S 
Sbjct: 347 LVSSSALTQDFYKAMLRKSASQTELVWVGRGMVLLIA---LIAIGIASNPESKVLGLVSY 403

Query: 394 TSIFVGIRLGSFVL-GLFSNQANEKGVIAGSIISIAAVLGARLMDIAWPWFAPIGTVFFL 452
                G   G  VL  L   +    G +AG ++    V       + W  F  +G ++ +
Sbjct: 404 AWAGFGAAFGPVVLISLLWKRMTRNGALAGMLVGAVTV-------VVWKEFIGLG-LYEI 455

Query: 453 VSGVVIS 459
           + G +++
Sbjct: 456 IPGFILA 462