Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., sodium/proline symporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 94.4 bits (233), Expect = 8e-24
 Identities = 98/439 (22%), Positives = 191/439 (43%), Gaps = 40/439 (9%)

Query: 13  YLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGWVYQSGM 72
           YL L + I ++  + +    D+  GGR+ G     +S+ A+ +S    +G+PG VY  G+
Sbjct: 14  YLALMMGIGFWAYKATDSVDDYILGGRKMGPGVTALSVGASDMSGWLLLGLPGAVYLGGL 73

Query: 73  EALNIHLNYPIVIFFAVVFF---IPVFYRMGFTSIY--EYLEHRFGVYARTINSVVFILV 127
               I +   I  +   +F    + ++ ++   ++   ++ E RF   A  +  V  + +
Sbjct: 74  GEAWIGIGLVIGAWLNWLFVAKRLRIYTQLADNALTLPDFFEKRFHDKAGLLRFVSALTI 133

Query: 128 QCI-----SSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQS 182
                   SSG++    A++  ++  +    A+V  +     YT+ GG   V WTD  Q 
Sbjct: 134 LVFFTFYASSGMV--GGAILFEKVFGLDYTAALVIGSAIIVGYTFVGGFFAVSWTDFFQG 191

Query: 183 AVLIAGSVAIFVLLLLQVDG---VHGVSREQLNIINLQFDLGVDTTLWAGVVAVSFLHMS 239
            +++   + + + +    +    +  +S E L++I      G  TTL  GV ++    + 
Sbjct: 192 CLMLIALLIVPMAIFTNSESHASIDTLSPEMLSLI------GEGTTLM-GVASLMAWGLG 244

Query: 240 VYGTNQLIIQRTLATRCE------KTAQKSMLLCGYGAFFIYFFFALLGVLLSIFYQERH 293
            +G   ++ +     R E      + A   M++   GA          G+  S+++ +  
Sbjct: 245 YFGQPHILSRFMAIERPEHLPVSRRIAMSWMIVSLMGAL-------ATGLAGSLYFAKEP 297

Query: 294 FTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVATFDLYQRFIRRNA 353
             N+  V +       NPW+ GL+I+A+ +A MST+DS     ++V T D Y++ +R  A
Sbjct: 298 LANAETVFIHLAQVAFNPWIAGLLIAAILSAIMSTIDSQLLVCSSVVTEDFYRK-LRPKA 356

Query: 354 PDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVGIRLGSFV-LGLFSN 412
            D+    V R   +    + +I  ++A+  +S +  + S      G   G  V L LF  
Sbjct: 357 DDNELMRVGR---IGVLAIAIIAGVVALDPQSSVLGLVSYAWAGFGAAFGPVVLLSLFWR 413

Query: 413 QANEKGVIAGSIISIAAVL 431
             ++ G +A  I     V+
Sbjct: 414 GYSKTGALATIITGAVTVV 432