Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., Na+/solute symporter (RefSeq) from Shewanella amazonensis SB2B

 Score = 73.2 bits (178), Expect = 3e-17
 Identities = 105/469 (22%), Positives = 198/469 (42%), Gaps = 52/469 (11%)

Query: 8   IVIAIYLILTILISWFVNQRSIGNTD-FSTGGRQFGWFTAGVSILATYISAMTFIGMPGW 66
           +VI  YL+ T+ +  ++++ +  + + +   G++  W+  GVS  +        + +   
Sbjct: 9   LVIGAYLLGTLGLGVYISRLASRDMNAYFLAGKEIPWWALGVSNASGMFDIAGTMWLVSM 68

Query: 67  VYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSI-YEYLEHRFGVY--ARTINSVV 123
            +  G+++  +   +PI     ++ ++ V+ R        ++L+ RFG    A     VV
Sbjct: 69  CFVYGLKSAWLPWVWPIFNQVFLMVYLSVWLRRSNVMTGAQWLQTRFGSGRGAELCQLVV 128

Query: 124 FILVQCISSGVILYA---IALILIQILPISIVEAIVYITLF--TACYTYAGGISTVIWTD 178
            I     + G I YA   I        P  +      + +F  T  Y   GG+ +V++T+
Sbjct: 129 VIFAIVSAIGFIAYAFKGIGKFAAIFFPWQLSPDTYALIIFAVTCLYVIKGGMYSVVFTE 188

Query: 179 MLQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNII------NLQFDLGVDTTLWAGVV- 231
           ++Q  ++   +VA+ ++       ++ V+ EQ+         N+ F   +D   W G++ 
Sbjct: 189 VMQFVIMTIAAVAVGLI------AINLVTPEQIKAATPEGWDNIWFGWQLDLN-WQGLID 241

Query: 232 ------------AVSFLHMSVYGTNQLI----------IQRTLATRCEKTAQKSMLLCGY 269
                        +  + M +     L           +QR LATR  K A K   L   
Sbjct: 242 SVNDKIRADSLELIGLMIMMMLFKGVLFSMAGPVPNYDMQRILATRSPKEAAKMSGLVSL 301

Query: 270 GAFFI-YFFFALLGVLLSIFY----QERHFTNSNEVILDFVFHHTNP-WVIGLIISALAA 323
             FF  Y   A L VL  ++     Q +  +   E IL +  H+  P  + GL+I+ L A
Sbjct: 302 VMFFPRYMMVAGLTVLALVYMGPEIQAQGGSFDFEQILPYAIHNFVPVGLTGLLIAGLLA 361

Query: 324 AAMSTLDSTYNSMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGL-VVIPALLAVS 382
           A MSTL ++ N+       D+Y+R+ R +A +  Y  V+  +SLV   + V +  +L+  
Sbjct: 362 AFMSTLAASLNAAPVYFVNDIYKRYFRPDAEERTYVKVSYLVSLVLVLIGVGLGLMLSSI 421

Query: 383 NESVLKTIASLTSIFVGIRLGSFVLGLFSNQANEKGVIAGSIISIAAVL 431
           NE +     +L   +    L  +    F+      G++AG + S+   L
Sbjct: 422 NEIMQWIFGALFGGYAAANLLKWHWWRFNAYGYFWGMMAGLLASLCLPL 470