Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Na+/solute symporter (NCBI) from Rhodospirillum rubrum S1H

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 94/475 (19%), Positives = 189/475 (39%), Gaps = 44/475 (9%)

Query: 2   VTYSTFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFI 61
           V  +   +   ++I T+ I+++  +R+    DF   G     F  G++I   Y+SA +F+
Sbjct: 39  VNVTAIAMFVAFVIGTLFITYWAARRTKSAKDFYAAGGGITGFQNGLAIAGDYMSAASFL 98

Query: 62  GMPGWVYQSGMEALNIHLNYPI---VIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYART 118
           G+ G V+ SG + L   + + +   VI F V   +    +  F  +  +   +  + +  
Sbjct: 99  GIAGLVFTSGFDGLIYSIGFLVGWPVIMFLVAERLRNLGKYTFADVASFRLGQGPIRSMA 158

Query: 119 INSVVFILVQCISSGVILYAIALI-----LIQIL-PISIVEAIVYITLFTACYTYAGGIS 172
            +  + +        VILY IA +     LI++L  +    A+V + +    Y   GG+ 
Sbjct: 159 ASGTLVV--------VILYLIAQMVGAGKLIELLFGLDYSTAVVLVGVLMVSYVMFGGML 210

Query: 173 TVIWTDMLQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFDLGVDTTLWAG--- 229
              W  ++++ +L++G+  + +++L+      G S E L    ++        +  G   
Sbjct: 211 ATTWVQIIKAVLLLSGASFMAIMVLVS----FGFSPEALFAKAVEVHAKKTLLMAPGGLV 266

Query: 230 ---VVAVSFLHMSVYGTNQL--IIQRTLATRCEKTAQKSMLLC-GY-GAFFIYFFFALLG 282
              + A+S     ++GT  L  I+ R       K A+KS+    G+ G F+I  F    G
Sbjct: 267 SDPIDAISLGIALMFGTAGLPHILMRFFTVSDAKEARKSVFYATGFIGYFYILTFIIGFG 326

Query: 283 VLLSIFYQERHFT--------NSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYN 334
            ++ +  Q              SN   +           +G I +   A  ++ +     
Sbjct: 327 AIVMVLNQPEFMAADGKGIAGGSNMAAIHLAHAVGGNIFLGFISAVAFATILAVVSGLTL 386

Query: 335 SMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLT 394
           S A+  + DLY    R+       +    K++ V  G+V I   +A  ++++   +    
Sbjct: 387 SGASAVSHDLYASVWRKGRVSERDEIRVSKITTVGLGVVAILLGIAFESQNIAFMVGLAF 446

Query: 395 SIFVGIRLGSFVLGLFSNQANEKGVIAGSIISIAAVLGARLMDIAWP--WFAPIG 447
           +I          + +F      +G   G     A ++ A ++ I  P  W   +G
Sbjct: 447 AIAASANFPILFMSMFWKGLTTRGAFIG---GFAGLISATVLVILGPPIWKTVLG 498