Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., sodium/pantothenate symporter from Rahnella sp. WP5

 Score = 71.2 bits (173), Expect = 8e-17
 Identities = 100/446 (22%), Positives = 179/446 (40%), Gaps = 59/446 (13%)

Query: 13  YLILTILISWFV-NQRSIGN--TDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGWVYQ 69
           YL+L   +S +   +R  GN  T++  G R  G F   +++ ATYISA +FIG PG  Y+
Sbjct: 12  YLLLVFGLSVYAYTRREQGNFLTEYFLGNRSMGGFVLAMTLTATYISASSFIGGPGAAYK 71

Query: 70  SGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYAR-----TINSVVF 124
            G+            +  A++    V+  +G       L  +F + AR     T+N ++F
Sbjct: 72  FGLG----------WVLLAMIQLPAVWLSLG------VLGKKFAILARRYNAVTLNDMLF 115

Query: 125 ------ILVQCISSGVILYAIALILIQILP----ISIVEAIVYIT------LFTACYTYA 168
                 +LV   S  +++  +  + +Q +     +     I Y T      +  A YT  
Sbjct: 116 ARYQSRLLVWLASLSLLVAFLGAMTVQFIGGARLLETAAGIPYDTGLLIFGISIALYTAF 175

Query: 169 GGISTVIWTDMLQSAVLIAGSVAIFVLLLLQVDGVH-GVSREQLNIINLQFDLGVDTTLW 227
           GG    +  D +Q  V++ G++ + + ++    G+H  V + Q     L    G D  L 
Sbjct: 176 GGFRASVLNDAMQGLVMLLGTILLLIAVIHAAGGLHSAVDKLQQIDPKLVSVHGGDDVLS 235

Query: 228 AGVVAVSFLHMSVYGTNQL--IIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGVLL 285
              +A SF  +  +G   L     R ++ +  K   + ++L       +     L G L 
Sbjct: 236 LPFMA-SFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIVLGTIVVAILMLGMHLAGALG 294

Query: 286 SIFYQERHFTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVATFDLY 345
                +      ++VI   +     P+  G+ ++A  AA MST+++     +     DLY
Sbjct: 295 RAILPDLKI--PDQVIPTLMITVLPPYAAGIFLAAPMAAIMSTINAQLLQSSATIVKDLY 352

Query: 346 QRFIRRNAPDHHYQAVARKMSLVAAGLVVI------PALLAVSNESVLKTIASLTSIFVG 399
                    +          +    GL+V+      P ++   N   L     L ++F  
Sbjct: 353 LGIKPEQLTNERKLKRFSSWATFILGLLVLLAAWRPPEMIIWLN---LLAFGGLEAVF-- 407

Query: 400 IRLGSFVLGLFSNQANEKGVIAGSII 425
             L   VLGL+  +AN  G ++  I+
Sbjct: 408 --LWPLVLGLYWERANATGALSSMIV 431