Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., D-galactose transporter (from data) from Pedobacter sp. GW460-11-11-14-LB5

 Score =  118 bits (295), Expect = 6e-31
 Identities = 125/554 (22%), Positives = 231/554 (41%), Gaps = 65/554 (11%)

Query: 7   FIVIAIYLILTILISWFVNQR----SIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIG 62
           +IV AIY ++      ++  +    S G+ D+        W+  G S++A+ ISA  FIG
Sbjct: 11  YIVFAIYFVIVAAYGLYIYNKKKSESTGSKDYFLAEGSLTWWAIGASLIASNISAEQFIG 70

Query: 63  MPGWVYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYARTINSV 122
           M G  ++ G+            +    VFFIPV+ +    ++ ++L  R+      I +V
Sbjct: 71  MSGSGFKMGLAIATYEWMGAATLVVVAVFFIPVYLKNKIATMPQFLHQRYNGTVAMIMAV 130

Query: 123 VFILVQ-CISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQ 181
            ++L+   ++   ILY  AL +  I    +   +  I  F    T  GG+  + +TD++Q
Sbjct: 131 FWLLLYVVVNLTSILYLGALAVSSISGFDLSFCMYAIAGFAIIIT-LGGMKVIGYTDVIQ 189

Query: 182 SAVLIAGSVAIFVLLLLQVDGVHGV-------------SREQLNII-----NLQFDLGVD 223
              LI G +A   L L  V   +G              + E  ++I         DL   
Sbjct: 190 VFFLILGGLATTYLALNLVSTHYGTTGIFEGYSLMTSKASEHFHMILKPENENYIDLPGL 249

Query: 224 TTLWAGVVAVSFLHMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGV 283
           + L  G+  V   +++ +G NQ I QR L    E TA+  +L   +    +     L G+
Sbjct: 250 SVLVGGMWIV---NLNYWGCNQYITQRALGANLE-TARGGILFAAFLKLLMPIIVVLPGI 305

Query: 284 LLSIFYQERHFTNSNEVILDFVFHHTNPWVI----------GLIISALAAAAMSTLDSTY 333
              + +++  F   +E++ D   +    + +          GL  +AL AA +++L    
Sbjct: 306 AAYVLFKDGAF--QSEMLQDGAVNPDRAYPVLLNLLPAGLKGLSFAALTAAVVASLAGKA 363

Query: 334 NSMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGL--VVIPALLAVSNESVLKTIA 391
           NS+AT+ T D+Y++ +R +A + +      K+S++ A +  V+I   L +  +   + I 
Sbjct: 364 NSIATIFTLDIYKKVLRTDATEKNL-VTTGKISIIVAMILGVLIAPHLGIDKKGGFQYIQ 422

Query: 392 SLTSIFVGIRLGSFVLGLFSNQANEKGVIAGSI----ISIAAVLGARLMDIAW------- 440
             T          F+LG F  +      +  +I    +SI       L D++W       
Sbjct: 423 EYTGFVSPGIFAMFILGFFWKRTTSTAALFATIGGFGLSILLKFLPNLTDLSWLSGMGFS 482

Query: 441 ----------PWFAPIGTVF-FLVSGVVISRYWGDNSIQQQAFIARQKHLFATPTMSQYG 489
                     P+   +G VF F + G+ I     + +  +   +A    +F T T    G
Sbjct: 483 VKNAAGVYEIPFLDRMGFVFVFCIIGMYIISMLSNKAEAEAKGLAIDAKMFKTSTSFAVG 542

Query: 490 LLVFAAVTIAVCAI 503
            L+   + +A+ ++
Sbjct: 543 ALIIIGLLVALYSV 556