Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., SSS family solute/sodium (Na+) symporter (RefSeq) from Shewanella loihica PV-4

 Score =  137 bits (346), Expect = 7e-37
 Identities = 121/482 (25%), Positives = 217/482 (45%), Gaps = 19/482 (3%)

Query: 8   IVIAIYLI-LTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGW 66
           +V A+ L+ L + IS    +      D+   G+   W+  G S++A+ ISA   IGM G 
Sbjct: 11  LVYALGLLGLALWISRQDKRHERDTKDYFLAGKALPWWAIGASLIASNISAEQIIGMSGS 70

Query: 67  VYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYARTINSVVFIL 126
            Y  G+   +      I +     + +P+F +    ++ +YLE RF    +T  ++ ++ 
Sbjct: 71  GYAIGLAIASYEWMAAITLILVGKYMLPIFIKNEIYTMPQYLEQRFDKRVKTTLALFWLS 130

Query: 127 VQ-CISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQSAVL 185
           V   ++   +L+   L +  +  I  +  +V++ LF+  Y+  GG+  V +TD++Q  +L
Sbjct: 131 VYILVNLTAVLWLGGLAIETVAGIDWLYGMVFLALFSLAYSLYGGLKAVAYTDIIQVVLL 190

Query: 186 IAGSVAIFVLLLLQVDGVHGV--SREQLNII---NLQFDLGVDTTLWAGVVAVSFL---- 236
           I G + +  L L +V    GV    ++L+     + +  L      +  +  +S L    
Sbjct: 191 IFGGLLLSYLALDRVADGQGVLAGFDRLSSALPEHFEMILSQSNPHYMSLPGISVLVGGL 250

Query: 237 ---HMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGVLLSIFYQERH 293
              ++S +G NQ IIQR LA +    AQK +    Y    +     L G+   + Y    
Sbjct: 251 WIMNISYWGFNQYIIQRALAAKSVAEAQKGIAFAAYLKLLMPLIVVLPGIAAVLLYPG-- 308

Query: 294 FTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVATFDLYQRFIRRNA 353
              S +     +       V GL+ +AL AA +S+L S  NS++T+ T D+Y   +R   
Sbjct: 309 -LESPDQAYPSMMALMPAGVKGLVFAALVAAIVSSLASMTNSISTIFTMDIY-AMLRPAK 366

Query: 354 PDHHYQAVARKMSLVAAGLVVIPAL-LAVSNESVLKTIASLTSIFVGIRLGSFVLGLFSN 412
            + HY  V R  SL++  + ++ A  L    E   + I   T +F    +  F+ G+F  
Sbjct: 367 SEGHYVLVGRLSSLISLLIALVMAQPLLGEFEQAFQYIQEFTGVFTPGIVVIFLTGMFWR 426

Query: 413 QANEKGVIAGSIISIAAVLGARLMDIAWPWFAPIGTVFFLVSGVVISRYWGDNSIQQQAF 472
           +A  +G +A ++ S     G R      P+   IG VF L   + +       S+++ A 
Sbjct: 427 RATSQGALAAALGSAIFSFGLRFYWPELPFMDRIGLVFLLCLALSVLVSLMGRSLEEGAS 486

Query: 473 IA 474
           +A
Sbjct: 487 VA 488