Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., sodium:solute symporter from Methanococcus maripaludis JJ

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 107/446 (23%), Positives = 200/446 (44%), Gaps = 29/446 (6%)

Query: 7   FIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGW 66
           ++ +A+Y+ + I I+    +R  G +DF  GGR    + +  S    Y SA+ FIG  G 
Sbjct: 4   YVFLAVYIAMIIGIATITKKRIKGVSDFLLGGRNVNPWMSAFSYGTAYFSAVIFIGFAGK 63

Query: 67  V-YQSGMEALNIHLNYPIVIFFAVVFFI-----PVFYRMGFTSIYEYLEHRF---GVYAR 117
           + +  G+  + I +   I+  F     +      +  R+G +++  +LE R+    + + 
Sbjct: 64  MGWSFGIPTMWIVVGNTIIGSFLAWQVLGKKTREMTQRLGASTMPSFLEKRYKSKNLESL 123

Query: 118 TINSVVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWT 177
           T   + F LV   +S   +Y     L +   IS + A + +   TA Y Y GG       
Sbjct: 124 TAFIIFFFLVPYSAS---IYKGLNFLFEGFGISPMNAYILMAALTAIYLYFGGFIAATLA 180

Query: 178 DMLQSAVLIAGSVAIFVLLL---LQVDGVHGVSREQLNIINLQFDLGVDTTLWAGVVAVS 234
           D +Q  +++ G V + V  L    +V G  G+    L+ I+      ++   +  ++ ++
Sbjct: 181 DFVQGCIMVIG-VLLMVFFLGSNPEVGGFFGM-LSNLSSIDPMLVTPINEASFIPIMGLA 238

Query: 235 FL-HMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGVLLSIFYQERH 293
            L  +  +G  Q+ I +    + EK A  +  +    AF I F  A +G +  +FY +  
Sbjct: 239 LLTSIGSWGLPQM-IHKFYTIKSEKAAVSAKWVSTAFAFIITFGAAYIGTVSRVFYPDSA 297

Query: 294 F-----TNSNEVILDFVFHHTNP-WVIGLIISALAAAAMSTLDSTYNSMATVATFDLYQR 347
                   S ++I+  +     P WV  LI+  + +A+MSTL S   + ++V + D  + 
Sbjct: 298 SKAAAGLTSPDMIVPKIMEIALPDWVAALILVLVISASMSTLASLVLASSSVVSIDFVKG 357

Query: 348 FIRRNAPDHHYQAVARKMSLVAAGLVVIPALLA-VSNESVLKTIASLTSIFVGIRLGSFV 406
            ++ +  D +   +   M L+    VV+  +LA V N  VL  +A    +  G  L  + 
Sbjct: 358 RLKTDLSDRNTMIL---MRLLCVLFVVLSFILAIVPNSYVLSLMALSWGLVSGCLLAPYF 414

Query: 407 LGLFSNQANEKGVIAGSIISIAAVLG 432
           LGL+  +  ++GV AG   ++  + G
Sbjct: 415 LGLYWKRTTKQGVWAGITSALVIMFG 440