Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., sodium/proline symporter PutP from Methanococcus maripaludis JJ

 Score = 83.6 bits (205), Expect = 2e-20
 Identities = 101/457 (22%), Positives = 190/457 (41%), Gaps = 42/457 (9%)

Query: 5   STFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMP 64
           S  +V  +YL++ + +  +  +R+   +D+  GGR+   + A +S  A+ +S    +G+P
Sbjct: 7   SIVLVFILYLLVVMGVGMYFYRRNETISDYVLGGRKLNSWVAALSAQASDMSGWLLMGLP 66

Query: 65  GWVYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYE-------YLEHRFGVYAR 117
           G  Y SGM  + I +   I  +    F      R  +T I +       YLE+RF   ++
Sbjct: 67  GVAYLSGMSEIWIGVGLAIGTYLNWKFVAERLRR--YTEIAKDSITIPVYLENRFRDQSK 124

Query: 118 TIN--SVVFILVQCI---SSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGIS 172
            +   S  FI++  +   SSG++  A   +   +  +    A+    L    YT+ GG  
Sbjct: 125 LLRIVSAFFIMLFFLLYTSSGLV--AGGKLFNLVFGVDYTLAVTIGALVIIGYTFLGGFL 182

Query: 173 TVIWTDMLQSAVLIAGSVAIFVLLLLQVDGV-------HGVSREQLN-IINLQFD-LGVD 223
            V WTD +Q +++      I ++ + QV G+       + +S + LN   NL  + LG+ 
Sbjct: 183 AVSWTDFIQGSLMFIAIFLIPIMGISQVGGIDATMNAWNSISPDYLNPFTNLDGESLGI- 241

Query: 224 TTLWAGVVAVSFLHMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGV 283
                G+ +     +  +G   ++++       +K  +   +   +    I  F A+L  
Sbjct: 242 ----MGLASALAWGLGYFGMPHILVRFMAIKSADKVPKARKIATTW--VVISLFMAVLVG 295

Query: 284 LLSIFYQERHFTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVATFD 343
           ++          +   V +          + GL ++ + AA MST DS     A+  T D
Sbjct: 296 MVGAVALGAPLDDPEHVFMAMAQGLFPSLIAGLFLAGVLAAIMSTADSQLLVTASAITED 355

Query: 344 LYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVGIRLG 403
           +Y   + +NA       ++R   +V A +    A+  V   SV+  ++   + F G    
Sbjct: 356 IY-ALLNKNASQKELLWISRFAVIVVAAIAYYFAI--VPGSSVMGLVSYAWAGFGGAFGP 412

Query: 404 SFVLGLFSNQANEKGVIAGSIISIAAVLGARLMDIAW 440
             +L L+  +    G +AG       +L    M I W
Sbjct: 413 VILLSLYWKRMTRNGALAG-------LLSGGFMVILW 442