Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., Sodium/pantothenate symporter (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 80.5 bits (197), Expect = 1e-19
 Identities = 103/457 (22%), Positives = 189/457 (41%), Gaps = 48/457 (10%)

Query: 4   YSTFIVIAIYLILTILIS-WFVNQRSIGNT------DFSTGGRQFGWFTAGVSILATYIS 56
           + T + + +YL L+  ++ W   + + G +      ++  GGR  G F   ++I+A+Y S
Sbjct: 5   FMTTVPVVLYLALSFGVALWARGRTAEGGSAKDIIEEYYIGGRSMGGFVLAMTIIASYTS 64

Query: 57  AMTFIGMPGWVYQSGME-ALNIHLNYPIVIFFAVVF---FIPVFYRMGFTSIYEYLEHRF 112
           A +F+G PG  Y+ G+   L   +  P       V    F  V  R G  ++ +YL  R+
Sbjct: 65  AGSFVGGPGVAYRLGLSWVLLAMIQVPTTFLTLGVLGKRFAIVARRAGAVTLTDYLLARY 124

Query: 113 GVYARTINSVVFILVQCISSGVILYAIALILIQIL-------PISIVEAIVYITLF---T 162
             +         +++ C S+ ++++ +A +L Q +        ++    +V + LF    
Sbjct: 125 RSHT--------VVILC-SAALLVFFMAAMLAQFIGGARLFQTVTGYPYVVGLALFGVTV 175

Query: 163 ACYTYAGGISTVIWTDMLQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFDLGV 222
             YT  GG   V+ TD +Q  V++   VA+ V+LL  +D   G++  Q        D G+
Sbjct: 176 VLYTAVGGFRAVVVTDAVQGIVMV---VAVVVVLLAVIDAGGGMT--QCIATLKAIDPGL 230

Query: 223 DTTLWAGVVA-----VSF---LHMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFI 274
            T    G        +SF   + + V G  Q   QR +  R  +    +M++      F+
Sbjct: 231 ITPTGPGDAVPQPFMLSFWVLVGLGVLGLPQ-TTQRCMGYRDSRAMHDAMIIGTLLIGFM 289

Query: 275 YFFFALLGVLLSIFYQERHFTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYN 334
                L G L      +      +  +   +    +P+  G+ I+   AA MST+DS   
Sbjct: 290 ILCAHLAGTLGRAVLPD--LPAGDLAMPSLIVQLLSPFWAGVFIAGPLAAIMSTVDSMLL 347

Query: 335 SMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLT 394
             +     DLY R+              ++MS+ +  ++ +   +A      L    +L 
Sbjct: 348 LASAAIVKDLYVRYRLGGDTSRLRPVTMKRMSVASTAVIGVLVFVAAMEPPDLLVWINLF 407

Query: 395 SI--FVGIRLGSFVLGLFSNQANEKGVIAGSIISIAA 429
           +      + L   VLGL+  + N  G IA  +  + A
Sbjct: 408 AFGGLEAVFLWPLVLGLYWRRGNATGAIASILSGVTA 444



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 150 SIVEAIVYITLFTACYTYAGGISTVIWTDMLQSAVLIAGSVA 191
           SI+  +      T      GGI  ++ T +L   + +AGS+A
Sbjct: 437 SILSGVTAFVWLTIAKPDMGGIHAIVPTTLLSLVMFVAGSLA 478