Pairwise Alignments

Query, 476 a.a., L-serine ammonia-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., L-serine dehydratase 1 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  440 bits (1131), Expect = e-128
 Identities = 226/454 (49%), Positives = 311/454 (68%), Gaps = 7/454 (1%)

Query: 21  MLSIFDIYKIGVGPSSSHTNGPMIAGYRFVQQLLP--QLNKVARIQVDLYGSLSLTGKGH 78
           M+S+FD++KIG+GPSSSHT GPM AG  F+Q L    Q+ ++  ++ +L+GSL  TGKGH
Sbjct: 1   MISVFDMFKIGIGPSSSHTVGPMKAGKIFMQHLADSGQIGQIDELRAELFGSLGQTGKGH 60

Query: 79  HTDRATLLGLMGNQPATIKIGDANQTLREALQTGKLRLNGQHDIAFDYHQDLLFHQ-DNL 137
            T +A +LGLMG  P T+     +  L    ++  L ++    + F     + +H+  +L
Sbjct: 61  GTGKAVILGLMGEDPETVDTDSIDGILEHVSKSETLTISCGKVVKFTREDGITYHRRKSL 120

Query: 138 PLHENGMTLSAFDTQGQQIDFETYYSVGGGFVATAEQL--QNGTATADV-TVTYPFTSAD 194
           P H N MTL A+ ++G+ I   TYYSVGGGF+   +++  +N +  + + +  Y F S+ 
Sbjct: 121 PAHANAMTLYAY-SKGECIFERTYYSVGGGFILDEDEINQRNASPASQIESAPYDFNSSA 179

Query: 195 EMLHQAEKHGLSLGGMILRNELAFQEMAVIDAKADQIWRVMSQCMERGFATEGILEGGLN 254
           ++L    +HGLS+  +++ NEL+      + AK   IW+ M  C+ERG+  EGIL GGL 
Sbjct: 180 QLLELCTEHGLSISSLMMANELSLASEEEVKAKLWNIWQTMKTCIERGYQKEGILPGGLK 239

Query: 255 VTRRAPSLLKKLEANAAIENDPMEVMDWINLFAFAVSEENAAGGQVVTSPTNGAAGVIPA 314
           + RRAP+L ++L+A      DP+  MDW++LFA +V+E+NAAG +VVT+PTNGAAG+IPA
Sbjct: 240 LRRRAPALYRRLKAEGRNNVDPLTAMDWVDLFALSVNEQNAAGDRVVTAPTNGAAGIIPA 299

Query: 315 VLMYYHRFIKALDTKQLKDFLAVSGAIGILYKTNASISGAEVGCQGEVGVSSSMAAAGLT 374
           VL YY  F++ +D      +L  + AIGILYK NASISGAEVGCQGEVGV+ SMAA  LT
Sbjct: 300 VLCYYDTFVQEVDIDVCARYLLTAAAIGILYKKNASISGAEVGCQGEVGVACSMAAGALT 359

Query: 375 ALRGGSNEQICMAAEIAMEHSLGMTCDPIGGLVQVPCIERNAMGAVKAINASRMALKRTS 434
            + GG+ E +  AAEI MEH+LG+TCDP+GGLVQVPCIERNAMGA+KAINASRMAL+   
Sbjct: 360 EIMGGTVEHVENAAEIGMEHNLGLTCDPVGGLVQVPCIERNAMGAIKAINASRMALRGDG 419

Query: 435 KCLISLDKVIETMYQTGKDMNKKYRETSLGGLAL 468
              +SLDKVI+TM  TGKDM  KY+ET+ GGLA+
Sbjct: 420 NHKVSLDKVIKTMMDTGKDMRSKYKETAKGGLAV 453