Pairwise Alignments

Query, 476 a.a., L-serine ammonia-lyase from Vibrio cholerae E7946 ATCC 55056

Subject, 411 a.a., L-serine dehydratase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  268 bits (685), Expect = 3e-76
 Identities = 176/449 (39%), Positives = 239/449 (53%), Gaps = 55/449 (12%)

Query: 21  MLSIFDIYKIGVGPSSSHTNGPMIAGYRFVQQLLPQLNKVARIQVDLYGSLSLTGKGHHT 80
           M SI ++Y+IG GPSSSHT GP  A   FV++        A  +V LYGSL+ TGKGH T
Sbjct: 10  MKSIKELYRIGTGPSSSHTMGPRKAAEMFVERH----PDAASFKVTLYGSLAATGKGHMT 65

Query: 81  DRATLLGLMGNQPATIKIGDANQTLREALQTGKLRLNGQHDIAFDYHQDLLFHQDNLPLH 140
           D A +  L    P  I                               Q  +F    LP H
Sbjct: 66  DVAIIDTLQPAAPVEI-----------------------------VWQPKVF----LPFH 92

Query: 141 ENGMTLSAFDTQGQQIDFETYYSVGGGFVATAEQLQNGTATADVTVTYPFTSADEMLHQA 200
            NGMT +A D   + ++  T YS+GGG +A      N   T +    Y   +  E+L   
Sbjct: 93  PNGMTFAALDADNKILENWTVYSIGGGALAE----NNDNPTIESPEVYGMNNMTEILQWC 148

Query: 201 EKHGLSLGGMI--LRNELAFQEMAVIDAKADQIWRVMSQCMERGFATEGILEGGLNVTRR 258
           E+ G S    +    NE  +  +A       ++W  M   + RG   EG+L G LN+ R+
Sbjct: 149 ERTGKSYWEYVKECENEDIWDYLA-------EVWDTMKDAIHRGLEAEGVLPGPLNLRRK 201

Query: 259 APSLLKKLEANAAIENDPMEVMDWINLFAFAVSEENAAGGQVVTSPTNGAAGVIPAVLMY 318
           A +   +    A      ++    +  +A AVSEENA+GG++VT+PT G+ GV+PAVL +
Sbjct: 202 ASTYYIR----ATGYKQSLQSRGLVFSYALAVSEENASGGKIVTAPTCGSCGVMPAVLYH 257

Query: 319 YHRFIKALDTKQLKDFLAVSGAIGILYKTNASISGAEVGCQGEVGVSSSMAAAGLTALRG 378
             +     D + L+  LA +G IG + K NASISGAEVGCQGEVGV+ +MA+A    L G
Sbjct: 258 LQKSRDFSDMRILRA-LATAGLIGNIVKFNASISGAEVGCQGEVGVACAMASAAANQLFG 316

Query: 379 GSNEQICMAAEIAMEHSLGMTCDPIGGLVQVPCIERNAMGAVKAINASRMALKRTSKCLI 438
           GS  QI  AAE+ +EH LGMTCDP+ GLVQ+PCIERNA  A +A++A+  +        +
Sbjct: 317 GSPAQIEYAAEMGLEHHLGMTCDPVCGLVQIPCIERNAYAAARALDANLYSAFTDGMHRV 376

Query: 439 SLDKVIETMYQTGKDMNKKYRETSLGGLA 467
           S DKV++ M QTG D+   Y+ETS GGLA
Sbjct: 377 SFDKVVQVMKQTGHDLPSLYKETSEGGLA 405