Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  176 bits (446), Expect = 2e-48
 Identities = 110/379 (29%), Positives = 199/379 (52%), Gaps = 4/379 (1%)

Query: 208 VEEMFKAFSKTLTQAVDDKQKTMTTTKLSVTIAVVLIILLVI---FQISRSINLQVSQLL 264
           + ++ + FSK ++      Q+    +++ V++ VV   L  +     ++RSI   + + L
Sbjct: 163 LNDLAELFSKQVSIESQKSQEHYANSRMVVSLFVVFAALATVALAMLLTRSIVKPLGEAL 222

Query: 265 LVIQRIAQSNDISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMH 324
              + +A+  D++   E  GNDE++ + +   ++       +      + QL ++   ++
Sbjct: 223 NAAENVARG-DLTRPIETHGNDEVSRLLKALAAMQQNLRETLQGISGSAAQLATAADELN 281

Query: 325 DELEQVIEQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVV 384
                  +    Q+  +   AT+V +M + + E++ +     D   Q++ +A  G+  V 
Sbjct: 282 AVTLDSTQSLQQQNNEIEQAATAVTEMTTAVEEVARNAVSTSDATRQSSESASLGQQRVS 341

Query: 385 TTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGE 444
            TV  I  L+S +Q +   + SL    + IG  + +I+ IAEQTNLLALNAAIEAARAGE
Sbjct: 342 DTVDAIGALASDVQVTGGLVQSLANQSQDIGKVLDVIRAIAEQTNLLALNAAIEAARAGE 401

Query: 445 QGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQ 504
            GRGFAVVADEVR+LA RT QST+EI ++V  ++S  +Q +D +   +++   TL+ + +
Sbjct: 402 SGRGFAVVADEVRALAYRTQQSTQEIEQMVQGMRSGATQALDSMQASSSRAASTLAMAER 461

Query: 505 LDESLQQILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTE 564
             ++LQ I   ++ I + +  IA+A EEQ  V   V  ++  +  +S  +   A Q    
Sbjct: 462 AGDALQTITASVNEIHERNLVIASAAEEQAQVAREVDRNLVNIRDLSVRSASGADQTSAS 521

Query: 565 VDTVSRQAHAMDEAVAEFR 583
              +S+ A+++   V  F+
Sbjct: 522 SHELSQLANSLRTMVQRFQ 540