Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  178 bits (451), Expect = 6e-49
 Identities = 120/350 (34%), Positives = 190/350 (54%), Gaps = 9/350 (2%)

Query: 237 VTIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSNDISLRAELKGNDE----ITAVA 292
           V+I+  L  +++   ++RSI   +++ L   + IA  N + + A+  G DE    + A+A
Sbjct: 195 VSISAALATVVLALLLTRSIVAPLNRALEAARTIASGNLVQVIAD-DGKDEPGRLLQALA 253

Query: 293 RYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMV 352
               SL    E  I+ S T+        S++  E  + ++Q   Q   +   AT+V +M 
Sbjct: 254 TMQVSLRQTIEQ-IAGSATQLGAAAQELSAVTQESSRGLQQ---QHNEIEQAATAVNEMT 309

Query: 353 STISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVE 412
           + + E++ +     +  NQ+ + A++GR+ VV TV  I  ++  +Q +   I  L     
Sbjct: 310 AAVEEVARNAVSTSEASNQSTQAAQEGRTRVVETVDAIQTMTHDVQATASMIEGLAVQGR 369

Query: 413 KIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITR 472
            IG  + +I+ IAEQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT QST+EI +
Sbjct: 370 DIGKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQEIEK 429

Query: 473 VVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEE 532
           +V+ IQ+   Q V  +   N + Q TL  +R    +L+QI + +H I + +  IA+A EE
Sbjct: 430 MVAGIQNGTGQAVQSMQQSNQRTQSTLEMARAAGVALEQITQSIHQINERNLVIASASEE 489

Query: 533 QGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEF 582
           Q  V   V  ++  +  ++  +   A+Q       +SR A  ++  VA F
Sbjct: 490 QAQVSREVDRNLVNIRDLATQSASGAKQTSDATHELSRLAVGLNAMVARF 539