Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  180 bits (457), Expect = 1e-49
 Identities = 111/365 (30%), Positives = 199/365 (54%), Gaps = 4/365 (1%)

Query: 223 VDDKQKTMTTTKLSVTI---AVVLIILLVIFQISRSINLQVSQLLLVIQRIAQS-NDISL 278
           VDD Q    +  +  ++   A+ L++ L++  I RSI   + + +  +  IA   +D++ 
Sbjct: 179 VDDVQTEFRSQLIKASLIGLAITLVMGLLLTLIVRSIVRPLQETVNAMANIASGESDLTR 238

Query: 279 RAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQS 338
             +  G DE+T +AR+FN+   K   ++S  Q  +  L  S+S + ++  Q  E+   QS
Sbjct: 239 TLDTHGQDEVTQLARHFNAFTAKLRQVVSQLQESASALGQSSSELGNDAAQAQERSQQQS 298

Query: 339 EHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQ 398
           + M L+AT++ ++   + +++++   A   +  A   A+QG+  +  +++ ID LS T+ 
Sbjct: 299 QQMELVATAINEVTYGVQDVAKNAEHAASEMRDAESQAQQGQVNIDGSLQQIDRLSQTID 358

Query: 399 KSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRS 458
           ++   I +L +   +IG  + +I+ IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 
Sbjct: 359 QAVEVIRTLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRL 418

Query: 459 LATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHT 518
           LA RT +ST EI  ++  +Q+     V  I   +   Q T+  +     SL  I + +  
Sbjct: 419 LAQRTQKSTAEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRN 478

Query: 519 IQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEA 578
           +   +  IA+A  +Q  V+  +++++ +   +S +   +A+Q       +   +  ++  
Sbjct: 479 LNSLNASIASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASSRLKALSEQLNGL 538

Query: 579 VAEFR 583
           + +FR
Sbjct: 539 LKQFR 543