Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

 Score =  179 bits (453), Expect = 3e-49
 Identities = 161/552 (29%), Positives = 258/552 (46%), Gaps = 49/552 (8%)

Query: 38  AINQVDKLEVRLLNLRRNEKDFLLRSDAKYLDTFQKNTDLFLNLQTELDAIMLKYELGDS 97
           A+NQ+ K+      +  N    +     K LD F   T L L L+     +++  E  D 
Sbjct: 25  ALNQMSKIRDAAEEITSNSVPSI-----KSLDEF---TQLTLRLRVLSYRLLVNRE-PDV 75

Query: 98  NALRTDLLEYKQGFEQLVRAYQTLGLNPESGLWKSYYQALEQAKQQASAEELLALVDFHQ 157
                DLLE +    Q +RA Q            +Y + +   +++A+ ++ + L+  ++
Sbjct: 76  QQKTIDLLETRN---QQIRAAQA-----------AYEKLIASPQERAAYDQYVQLLGQYR 121

Query: 158 QVLAGSANSSALNQFSDLIKSAQA-VVNQAKVIGLKYNEGLLGATRSHSHDVEEMFKAFS 216
           Q+     + S  NQ  +L       ++N ++ I    N  LL      + D  +      
Sbjct: 122 QIEDRMKSLSRNNQVDELRTLLNTDLMNNSEAINTVLNR-LLEINTQQTVDTNQ------ 174

Query: 217 KTLTQAVDDKQKTMTTTKLSVTIAVVLIILLVIFQ--ISRSINLQVSQLLLVIQRIAQSN 274
               QA D          L VT+ V+   L ++F   ++ SI   ++  L   + IA+ N
Sbjct: 175 ----QAADQYSSAFN---LVVTLLVIATGLTLLFAWLLTNSITKPIANALSAAEEIAEGN 227

Query: 275 DISLRAELKGNDE----ITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQV 330
            ++    + G DE    + A+A+    L D  +  IS S T+        +S+ DE  + 
Sbjct: 228 -LTRPITVDGEDEAGRLLAAMAKMQEKLRDTLQR-ISGSATQLASAAEELNSVTDESARG 285

Query: 331 IEQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNI 390
           + Q N + E     AT+V +M S + E++ +     +    A  +A  GR +V  TV  I
Sbjct: 286 LTQQNNEIEQA---ATAVNEMTSAVEEVARNAVSTSEASKNATTSAGDGRDLVQETVSAI 342

Query: 391 DLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFA 450
           + +S+ +Q +   IG L      IG  + +I+G+A+QTNLLALNAAIEAARAGE GRGFA
Sbjct: 343 ERMSADVQSTATLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFA 402

Query: 451 VVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQ 510
           VVADEVR+LA RT QST EI R++ +IQS     VD +     + + TL+ +R    SL 
Sbjct: 403 VVADEVRALAHRTQQSTSEIERMIGSIQSGTEHAVDSMRNSTERAESTLNIARGAGMSLD 462

Query: 511 QILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSR 570
            I   +  I + +  IA+A EEQ  V   V  ++  +  +S  +   A Q     + +SR
Sbjct: 463 TINSAIVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGANQTSAASNELSR 522

Query: 571 QAHAMDEAVAEF 582
            A  ++  V  F
Sbjct: 523 LALDLNNMVGRF 534