Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  173 bits (438), Expect = 2e-47
 Identities = 128/457 (28%), Positives = 222/457 (48%), Gaps = 19/457 (4%)

Query: 146 AEELLALVDFHQQVLAG--SANSSALNQFSDLIKSAQAVVNQAKVIGLKYNEG------L 197
           A E+L  +D  QQ LA   S          D  KS +   + A     K  +G      L
Sbjct: 83  AREVLQQIDTQQQSLAALLSDQRQQHQALGDWRKSVRDYADNALAASTKLIDGSASFDDL 142

Query: 198 LGATRSHSHDVEEMFKAFSKTLTQAVDDKQKTMT--------TTKLSVTIAVVLIILLVI 249
             +    + D+ +  K  S    QA D  Q+T+         TT+L + +++VL+IL+ +
Sbjct: 143 RPSLDRMASDLAQAQKLGSDFRAQAYDSFQQTLVETREANANTTRLGIILSLVLVILVSL 202

Query: 250 --FQISRSINLQVSQLLLVIQRIAQSN-DISLRAELKGNDEITAVARYFNSLLDKFEHLI 306
             + + RS+ + +  ++  +Q IA+ + D++ R  ++ NDEI A+   FNS LDK +  I
Sbjct: 203 GAWLVIRSVMVNIRGVIASLQSIARGDGDLTQRVNVESNDEIGAMIELFNSFLDKLQSTI 262

Query: 307 SSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTISEISESTNIAV 366
                 +  L   +  ++   +   E    Q  H   +   +  M  +I E+++ +  A 
Sbjct: 263 RQIIDAATPLGQVSKELYKLTQGSEENAKSQQHHTDSITRDILTMTGSIQEVAQRSQQAS 322

Query: 367 DGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAE 426
           D  N AAR A   R  V +    I  L  ++  +  ++  L    +++G  +++I+ IAE
Sbjct: 323 DEANSAARQAATAREHVGSLSTGISDLGDSVMGAVKAMEQLEEETQEVGSVLTVIRSIAE 382

Query: 427 QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVD 486
           QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T  ST EI +++  +Q+  + V++
Sbjct: 383 QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTAEIQQIIQRLQNSANTVLN 442

Query: 487 DIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAE 546
            +     + + ++  S +  + L+ I R ++ I + +  IA   +EQ  + + + +    
Sbjct: 443 VMTSNGEKSRASIQRSIEATQLLETIARTVNQIDELNAGIAQFTQEQIGLSSSIQQETQV 502

Query: 547 LNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
           L   ++     A+      + +      +  A  +FR
Sbjct: 503 LQQDAQATANGAEATARLGEQLVSTGDHLRAATGQFR 539