Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  171 bits (433), Expect = 6e-47
 Identities = 107/338 (31%), Positives = 184/338 (54%), Gaps = 4/338 (1%)

Query: 236 SVTIAVVLIILLVIFQIS-RSINLQVSQLLLVIQRIAQSNDISLRAELKGNDEITAVARY 294
           +  +AV+++ LL   Q+  R +   ++ L  V+  + +S D+  R  L   DE+  +A  
Sbjct: 140 ATAVAVLMLGLLAASQLLIRFLLSHLNTLKDVMLHVERSGDLQARVPLDSRDEVGQMASA 199

Query: 295 FNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVST 354
           FN++   ++ ++S+    + +L    S +   +  V +    Q       AT++ +M +T
Sbjct: 200 FNAMQGGYQRVVSTVAQAAARLDEGASRLATSMNDVHKGMRGQQGETDQAATAINEMSAT 259

Query: 355 ISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKI 414
           + +I+E      D    A R A  G  VV    K+I  LS  +Q++   I  L A  ++I
Sbjct: 260 VHQIAEHARETRDQSQNADRLAGDGHRVVGRVEKSISSLSQGVQQTGEMIEQLAADSQRI 319

Query: 415 GGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVV 474
            G V++I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA R   ST+EIT+++
Sbjct: 320 NGVVNVIHSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKRVQDSTDEITQMI 379

Query: 475 SNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQG 534
           S +QS     V+ +   + +  + +  +    ++L+ I   +  +++++ +IA A E+Q 
Sbjct: 380 SGLQSMTRDAVEFMQESSLKADDCVREAHDAAQALEAIADAVAQMRESNTQIAVAAEQQS 439

Query: 535 SVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQA 572
            V   ++ S+  +  ++E   R+ +Q ++   T +  A
Sbjct: 440 QVAEELNRSVTGIRDVTE---RTVEQTVSSASTSAELA 474