Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  176 bits (445), Expect = 3e-48
 Identities = 107/367 (29%), Positives = 194/367 (52%), Gaps = 3/367 (0%)

Query: 217 KTLTQAVDDKQKTMTTTKLSVTIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSNDI 276
           K L Q VD  +  M +  + + + V+ ++++ +  +   I  +++ +   +  +A+  D+
Sbjct: 175 KALDQEVD--RNIMISGAIQLLLLVIGVVVMCM-TVRHVIIRRINAMRHTMNAMAEDEDL 231

Query: 277 SLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNV 336
           S    +   DEI A+   FN ++ KF H + +    +HQL   +  +    E+ +   N 
Sbjct: 232 SRSVAIGAKDEIGAMGDAFNRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNE 291

Query: 337 QSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSST 396
           Q     ++A+++ +M +T+ E++ + N        A   ++ G  V    +  I++L + 
Sbjct: 292 QRSETDMVASAMNEMSATVQEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAE 351

Query: 397 LQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 456
           ++K+   I  + +    I   + +I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 352 IEKAAQVIQRVESDSASIDMVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 411

Query: 457 RSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDM 516
           R+LA+RT +STEEI  ++  +QS +   V  +     + +       +  +SL  I  ++
Sbjct: 412 RTLASRTQKSTEEIQAMIEQLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEV 471

Query: 517 HTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMD 576
            TI + + +IA A E+Q +V   ++ +I+ ++ I++     A Q     D + R A  ++
Sbjct: 472 GTINEMNTQIATAAEQQSAVAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELN 531

Query: 577 EAVAEFR 583
             V +F+
Sbjct: 532 RLVGQFK 538