Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  176 bits (446), Expect = 2e-48
 Identities = 112/350 (32%), Positives = 187/350 (53%), Gaps = 3/350 (0%)

Query: 235 LSVTIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSN-DISLRAELKGNDEITAVAR 293
           + + I+ ++ +L+ I  + RSI   +   +  +  IA    D++   ++ GNDE+T + R
Sbjct: 196 IGLLISAIMAVLVAI--LIRSIVRPLRHTMAAMANIASGEADLTRTLDVSGNDELTTLGR 253

Query: 294 YFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVS 353
            FN    K   ++      +  L  S+ S+     Q  EQ   Q   M  +AT++ ++  
Sbjct: 254 DFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQSQQQMLQMEQVATAINEVTY 313

Query: 354 TISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEK 413
            + E++++   A   V  A   A QG+  + T+++ ID LS+T+ ++   I SL     K
Sbjct: 314 AVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELSATIGQAVDVIQSLADETTK 373

Query: 414 IGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRV 473
           IG  + +I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA RT QST EI  +
Sbjct: 374 IGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQQSTAEIHGM 433

Query: 474 VSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQ 533
           +  +Q      V+ I   N   Q T+  + Q  ESL +I + +  +   +  IA+A  +Q
Sbjct: 434 IERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQALRNLSGLNASIASATLQQ 493

Query: 534 GSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
             V+  +++++ +   +++ +  +A+Q       +   A  ++  +++FR
Sbjct: 494 SHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQLNRLLSQFR 543