Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  186 bits (473), Expect = 2e-51
 Identities = 132/432 (30%), Positives = 216/432 (50%), Gaps = 13/432 (3%)

Query: 164 ANSSALNQFSDLIKSAQAVVNQAKVIGLKYNEGLLGA--TRSHSHDVEEMFKAFSKTL-- 219
           A    + +   L+K+A A ++  + I  +++E  L A         ++ + + FS+ +  
Sbjct: 108 AERRVVTRLEGLMKAADAPLDDLERILDRHSEKRLAAFVVNDLYPLIDPISEGFSELIHL 167

Query: 220 ----TQAVDDKQKTMTTTKLSVTIAVVLIIL----LVIFQISRSINLQVSQLLLVIQRIA 271
                +A  D+   +      + I ++L +L    L    + RSI+  + +L      +A
Sbjct: 168 QLGEAKAEYDEALALYERNRVLNIGLLLALLIGGGLFAMVLLRSISRPLEELKQAAASVA 227

Query: 272 QSNDISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVI 331
            + D+S     +G DEIT V +    +       +   Q  + QL S+   +H   +   
Sbjct: 228 -AGDLSRTIACRGKDEITEVQQSIRQMQQTLRDTLQDIQGSATQLASAAEELHAVTQHTA 286

Query: 332 EQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNID 391
           +  + Q+E + + AT+V +M + + E++ + N   D    A   A+ GR  V  T + ID
Sbjct: 287 QGIHQQNEEVQMAATAVTEMSAAVDEVAGNANRTSDASRDAETVADDGRRQVTATRQTID 346

Query: 392 LLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAV 451
            LS  LQ++  ++  L      IG  V +I+ IA+QTNLLALNAAIEAARAGE GRGFAV
Sbjct: 347 QLSEKLQQTAGTVTRLAEEAASIGQVVDVIRAIADQTNLLALNAAIEAARAGEAGRGFAV 406

Query: 452 VADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQ 511
           VADEVR+LA RT  ST+EI R++  IQS   Q V D+   +     + + + + D++L  
Sbjct: 407 VADEVRNLAQRTQSSTQEIERMIGAIQSATEQSVRDMQQSSEFATRSQTMAGEADQALGL 466

Query: 512 ILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQ 571
           I   +  I + +  IA+A EEQ  V   V  ++  +  ISE +   AQQ     D ++R 
Sbjct: 467 IAERVGQINEMNLVIASAAEEQAQVAREVDRNLVAIRDISEQSATGAQQTSVASDELARL 526

Query: 572 AHAMDEAVAEFR 583
           A  +++ V  FR
Sbjct: 527 ATHLNQLVGRFR 538