Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  182 bits (463), Expect = 3e-50
 Identities = 131/466 (28%), Positives = 233/466 (50%), Gaps = 15/466 (3%)

Query: 127 SGLWKSYYQALEQAKQQASAEE-LLALVDFHQQVLAGSANSSALNQFSDL-IKSAQAVVN 184
           +G+  S     +  KQ    E+  + L D + Q+     +  A  Q S L IK  QA+++
Sbjct: 180 AGVGLSLNSLADNIKQYKIGEQGRVYLTDGNGQIKIHGQSQFAGKQLSALGIKDPQALLS 239

Query: 185 QAKVIGLKY-NEGLLGATRSHSHDVEEMFKAFSKTLTQAVDDKQKTMTTTKLSVTIAVVL 243
           Q      +Y N G+     S          +    L   V   +      K S  +A++ 
Sbjct: 240 QQTFATSEYDNNGVDTLVASR------YIPSIGWYLIAEVPQDELFGAINKASWQLALMG 293

Query: 244 IIL--LVIFQISRSINLQVS---QLLLVIQRIAQSN-DISLRAELKGNDEITAVARYFNS 297
           +IL  +++F  +  IN  +S   +L  +++ I +   D+SLR +    DE  ++A  +N 
Sbjct: 294 LILAAIIMFTSAWLINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQDETGSMAASYNQ 353

Query: 298 LLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTISE 357
            +      + S    ++ L+ +   + ++ + +  + N Q   +  +AT++ +M  T  E
Sbjct: 354 FVTYLSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVATAIHEMGMTAQE 413

Query: 358 ISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGA 417
           I+ S N A +    A ++  QG   V  T+ ++  +S  L  +  ++  L      I   
Sbjct: 414 IASSANNAAENAQVADQSVNQGNQSVQNTIASVASMSEQLLTTSETVSQLAEDASSIDTV 473

Query: 418 VSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNI 477
           + +I+G++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+R+H STE+I  ++  +
Sbjct: 474 LEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSHASTEDIRHIIEKL 533

Query: 478 QSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVM 537
           Q++ ++VV+ I    NQ Q++   +    E L  I  ++  + + S +IA A EEQ +V+
Sbjct: 534 QAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMSMQIATATEEQSNVV 593

Query: 538 NHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
             ++  +  +  IS ++    +Q   +   +   A  ++E V+ F+
Sbjct: 594 GEINPHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRFK 639