Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Major porin and structural outer membrane porin OprF from Pseudomonas fluorescens FW300-N2E2

 Score = 67.8 bits (164), Expect = 2e-16
 Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 1/113 (0%)

Query: 88  PGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLN 147
           P    ++++   V+F+   + V   S   +  +A F+         +EGHTD+ G +  N
Sbjct: 224 PAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQYPSTSTTVEGHTDSVGPDAYN 283

Query: 148 DKLAERRANAVKAALV-QSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVE 199
            KL+ERRA AV+  L  Q  V  + +   G+GE+ P   N+T+ GRA NRRVE
Sbjct: 284 QKLSERRAKAVQQVLTNQYGVESSRVQAVGYGESRPVADNATEAGRAVNRRVE 336