Pairwise Alignments

Query, 207 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., outer membrane protein A (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 43/103 (41%), Positives = 59/103 (57%), Gaps = 2/103 (1%)

Query: 98  NTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDKLAERRANA 157
           N++ F   S+ ++  S Q+ D V+ FL        V+ GHTD+TGS+K N  L+ERRA +
Sbjct: 230 NSLLFAHNSSVLNNTS-QFADVVS-FLKQHPTASAVITGHTDSTGSDKYNQWLSERRAIS 287

Query: 158 VKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 200
           V   LV   V    + + G GE      N+T+NGRA NRRVEI
Sbjct: 288 VANYLVSQGVQSAQLTSVGKGETASVADNTTENGRAMNRRVEI 330