Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  140 bits (354), Expect = 9e-38
 Identities = 99/340 (29%), Positives = 171/340 (50%), Gaps = 11/340 (3%)

Query: 194 LASLLPAGVLGLLFRQELVRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASARI 253
           L +L+   ++G L  QE V     +     E D    L   G D  +    H    +A++
Sbjct: 207 LLTLIVRSIVGPL--QETVNAMANIAS--GESDLTRTLDTHGQDEVTQLARHFNAFTAKL 262

Query: 254 RTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSHT 313
           R ++ ++  SA  LG+ +++L     +  +    Q+  ++ V  A + V    + V+ + 
Sbjct: 263 RQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQQMELVATAINEVTYGVQDVAKNA 322

Query: 314 HSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIG 373
             A   +   +    + + +I+ + Q + RL+   + A      L+ ++ Q+G ++  I 
Sbjct: 323 EHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVEVIRTLASESTQIGSVLEVIR 382

Query: 374 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIE 433
            IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RTQ++T +IQ  I+ + +  E
Sbjct: 383 SIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQAMIERLQTHSE 442

Query: 434 AWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQ 493
           A    I  S   ++   + A      L  +   + ++  +   +ASA   Q  +  ++NQ
Sbjct: 443 AAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSLNASIASATLQQAHVVEDINQ 502

Query: 494 HI-------HSIASVATQNSAATHTVEQLAMAMSGKVAEF 526
           ++       HS A  A Q+S A+  ++ L+  ++G + +F
Sbjct: 503 NVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGLLTQF 542