Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  137 bits (346), Expect = 8e-37
 Identities = 99/288 (34%), Positives = 154/288 (53%), Gaps = 30/288 (10%)

Query: 251 ARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVS 310
           A +  + G +  +AR + ++A          H AL   ++   A TQ + AV   A   +
Sbjct: 267 AEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVST---AATQMSAAVHEVAHNAA 323

Query: 311 SHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMT 370
           + + +A Q   Q +D        ++ T +++++LA + ESA+ T   L+ +   +G ++ 
Sbjct: 324 NASGAAQQASSQSRDGA----EVVSSTIESIRQLAQEVESASGTIEALAQETSSIGAVLE 379

Query: 371 EIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLS 430
            I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL+ARTQ +T+ IQ  I+ + S
Sbjct: 380 VIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVRIERLQS 439

Query: 431 ----TIEAWRGDITASRDQTEQCA------QDANTTLQQLQDVECVMSDMLRVIGEVASA 480
                ++A     T +RD  E+ A           ++QQ+ D          +  ++ASA
Sbjct: 440 GVAKAVQAMHVGSTKARDSVERAAGVDQVLSGTGGSIQQIND----------MAAQIASA 489

Query: 481 AQHQRELTCEVNQHIHSI---ASVATQNSAATHTVEQLAMAMSGKVAE 525
            + Q  +T E+ ++I  I   ++ A  NSA +    Q   ++S  +AE
Sbjct: 490 CEEQSSVTEEIARNISDIRDLSNEAAANSAQSMHASQQLSSLSRNLAE 537



 Score = 36.6 bits (83), Expect = 2e-06
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 442 SRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHS---- 497
           S D+  Q     N  L +LQ +   ++++ RV GEV SAA+   ++    ++ I S    
Sbjct: 244 SADELGQLGSAFNRFLDKLQPL---IAEVGRVTGEVDSAARAMADMAATNDRLISSEHAA 300

Query: 498 ---IASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQFAQ 535
              +++ ATQ SAA H V   A   SG   +  + S+  A+
Sbjct: 301 LDQVSTAATQMSAAVHEVAHNAANASGAAQQASSQSRDGAE 341