Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  262 bits (669), Expect = 3e-74
 Identities = 166/506 (32%), Positives = 261/506 (51%), Gaps = 30/506 (5%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P  Q+E       +L+STTD KGVITYCND F  I+G+  +EL+   HN+VRH  +P A 
Sbjct: 6   PVTQRERTFPAQQRLISTTDAKGVITYCNDAFVDISGYSKEELIRSPHNLVRHPDVPSAV 65

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           FA MW  LKQG  W GIVKNR+K+G  YWV+AYVTP+++  Q+ GY+SVRVK   + +  
Sbjct: 66  FAHMWGTLKQGLPWMGIVKNRSKNGDHYWVNAYVTPVFEGNQVVGYESVRVKPSAEQIAR 125

Query: 142 ATKAYQ-------ALLAAEKAGKKIQFKLHTSL--RYALLLGALMSPALAHGFQAPEQWQ 192
           A   YQ       A+  ++K    +Q  L   L  + + ++GA +  +      A     
Sbjct: 126 AEALYQRINQGKSAVPGSDKWVPMLQDWLPFILVSQLSFVVGAFLDSSWGFALAA----- 180

Query: 193 WLASLLPAGVLGLLFRQELVRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASAR 252
                +P G++GL ++Q  ++   +L +       I+R+        +  +  +    AR
Sbjct: 181 --VLSVPLGLMGLQWQQRGIKRLLRLAEQTTSDPLIARMYTDSRGVQARLEMSILSQEAR 238

Query: 253 IRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSH 312
           ++T L R+ D+A  L + A Q +         L  Q    + V  A + + +  + V+SH
Sbjct: 239 LKTCLTRLQDTAEHLNDQARQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASH 298

Query: 313 -------THSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQV 365
                  T  A++L  + +D   ET+ +I       +RL+        T  +L+  + ++
Sbjct: 299 VQRTADATQEANRLTSRGRDIAGETREAI-------ERLSVVVGETGQTVTQLAKDSDEI 351

Query: 366 GQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSI 425
           G ++  I GIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RT  +T QI   I
Sbjct: 352 GGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALI 411

Query: 426 DTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQR 485
             +  T       + A   Q E+         + L  +   ++ +  +  ++A+A + Q 
Sbjct: 412 AKLQQTATNAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMTTQIAAATEEQS 471

Query: 486 ELTCEVNQHIHSIASVATQNSAATHT 511
            +  E++++I +I+ +A Q S   H+
Sbjct: 472 SVAEEISRNISNISELADQTSGQAHS 497