Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  144 bits (363), Expect = 8e-39
 Identities = 87/310 (28%), Positives = 153/310 (49%)

Query: 224 EYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQ 283
           E D    L  SG D  +         + ++RT++G++ ++A  L + +  L   + + H+
Sbjct: 233 EADLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHE 292

Query: 284 ALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQR 343
               Q   ++ V  A + V  A + V+ +   A   +   ++   + + +I  + Q +  
Sbjct: 293 QSQQQMLQMEQVATAINEVTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDE 352

Query: 344 LATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVV 403
           L+     A      L+D+  ++G ++  IG IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 353 LSATIGQAVDVIQSLADETTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVV 412

Query: 404 ADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDV 463
           ADEVR L+ RTQ++T +I   I+ +     A    I  S   ++   + A+   + L ++
Sbjct: 413 ADEVRLLAQRTQQSTAEIHGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEI 472

Query: 464 ECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKV 523
              + ++  +   +ASA   Q  +  ++NQ++   A +A +++ A     +    +    
Sbjct: 473 AQALRNLSGLNASIASATLQQSHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELA 532

Query: 524 AEFGALSKQF 533
            +   L  QF
Sbjct: 533 GQLNRLLSQF 542