Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  151 bits (381), Expect = 7e-41
 Identities = 107/346 (30%), Positives = 179/346 (51%), Gaps = 16/346 (4%)

Query: 194 LASLLPAGVLGLLFRQELVRTPQQLKQWQNEYDS--ISRLIYS-GADAFSVADYHLKMAS 250
           LA L+  G+  ++  + + R  ++LKQ      +  +SR I   G D  +     ++   
Sbjct: 195 LALLIGGGLFAMVLLRSISRPLEELKQAAASVAAGDLSRTIACRGKDEITEVQQSIRQMQ 254

Query: 251 ARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVS 310
             +R  L  +  SA  L   A +LH  TQ   Q +  QN  +Q    A   + +A + V+
Sbjct: 255 QTLRDTLQDIQGSATQLASAAEELHAVTQHTAQGIHQQNEEVQMAATAVTEMSAAVDEVA 314

Query: 311 SHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMT 370
            + +         +    + +  +  T Q + +L+ + +  A T  +L+++A  +GQ++ 
Sbjct: 315 GNANRTSDASRDAETVADDGRRQVTATRQTIDQLSEKLQQTAGTVTRLAEEAASIGQVVD 374

Query: 371 EIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLS 430
            I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RTQ +TQ+I+  I  + S
Sbjct: 375 VIRAIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAQRTQSSTQEIERMIGAIQS 434

Query: 431 TIEAWRGDITASRD---QTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQREL 487
             E    D+  S +   +++  A +A+  L  + +    +++M  VI   ASAA+ Q ++
Sbjct: 435 ATEQSVRDMQQSSEFATRSQTMAGEADQALGLIAERVGQINEMNLVI---ASAAEEQAQV 491

Query: 488 TCEVNQHIHSI-------ASVATQNSAATHTVEQLAMAMSGKVAEF 526
             EV++++ +I       A+ A Q S A+  + +LA  ++  V  F
Sbjct: 492 AREVDRNLVAIRDISEQSATGAQQTSVASDELARLATHLNQLVGRF 537