Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  144 bits (362), Expect = 1e-38
 Identities = 99/291 (34%), Positives = 157/291 (53%), Gaps = 13/291 (4%)

Query: 246 LKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESA 305
           L M    +R  +  +  SA  L   A +L+  T++ ++ L  QN+ I     A + + SA
Sbjct: 252 LAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATAINEMTSA 311

Query: 306 AERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQV 365
            E V+ +  S     +Q        +  +  T Q++Q L    ++ +     L++Q+Q +
Sbjct: 312 VEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQATSTLVQNLANQSQDI 371

Query: 366 GQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSI 425
           G+++  I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRAL+ RTQ++T +I + +
Sbjct: 372 GKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQSTLEIDSMV 431

Query: 426 DTMLSTIEAWRGDITASR---DQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQ 482
             M S        +  SR   D T   A+ A  +L ++      +S+   VI   ASAA+
Sbjct: 432 SAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLVI---ASAAE 488

Query: 483 HQRELTCEVNQHIHSIASV-------ATQNSAATHTVEQLAMAMSGKVAEF 526
            Q +++ EV+++I +I  +       A Q SA++H + +LA  ++  V+ F
Sbjct: 489 EQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRF 539