Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  144 bits (363), Expect = 8e-39
 Identities = 90/310 (29%), Positives = 153/310 (49%)

Query: 224 EYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQ 283
           E D    L   G D  +    H     A++R ++G++  SA  LG+ +  L    ++   
Sbjct: 232 ESDLTRTLETHGNDEITELGTHFNAFVAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQS 291

Query: 284 ALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQR 343
               Q+  +  V  A + V    + V+ +   A   +   +    + + +I+ + + ++ 
Sbjct: 292 RSEQQSQQMDLVATAVNEVTYGVQDVAKNAEHAASEMRDAESQAQQGQINIDNSLRQIEH 351

Query: 344 LATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVV 403
           L++    A      L+ ++ Q+G ++  I  IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 352 LSSTIGQAVQVMQSLASESTQIGSVLEVISSIAEQTNLLALNAAIEAARAGEQGRGFAVV 411

Query: 404 ADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDV 463
           ADEVR L+ RTQ++T +IQ+ I+ +    +A    I  S   ++   + AN   Q L  +
Sbjct: 412 ADEVRLLAQRTQKSTAEIQSMIERLQKHSDAAVKVIGDSSRSSQLTIEQANQAGQSLTSI 471

Query: 464 ECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKV 523
              + ++  +   +ASA   Q  +  ++NQ++   A ++   + A       ++ + G  
Sbjct: 472 SQALRNLNSLNASIASATLQQTHVVDDINQNVTQAAQLSQSTALAAEQSTSASLHLRGLS 531

Query: 524 AEFGALSKQF 533
            E   L KQF
Sbjct: 532 EELNTLLKQF 541