Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  138 bits (347), Expect = 6e-37
 Identities = 104/315 (33%), Positives = 165/315 (52%), Gaps = 22/315 (6%)

Query: 226 DSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQAL 285
           D  S +  S  D  SVA   + M + ++R  L ++  SA  L   A ++   T++  Q +
Sbjct: 242 DLSSTINISANDTSSVAAAVVAMQT-QLRDTLQQISSSATQLAAAAEEMTAITEDGVQGI 300

Query: 286 AAQNSNIQ----AVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNL 341
             QN+ I     AV + T AVE  A        S+       QD     K ++     ++
Sbjct: 301 QRQNNEIDQAATAVNEMTSAVEEVARNAEHTARSSSNATSAAQDGLGLVKKTVT----SI 356

Query: 342 QRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFA 401
             ++T  +  A    +L+ Q++ +G+++  I G+AEQTNLLALNAAIEAARAGE GRGFA
Sbjct: 357 NTMSTDVQKTATLIGELAGQSRDIGKVLDVIRGLAEQTNLLALNAAIEAARAGEAGRGFA 416

Query: 402 VVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDI---TASRDQTEQCAQDANTTLQ 458
           VVADEVRAL+ RTQ++T +I+  +  + +  E   G +   T    +T   A+ AN +L 
Sbjct: 417 VVADEVRALAHRTQQSTSEIERLVTNIQNGTERAVGSMRGNTELASETLGIAEGANESLT 476

Query: 459 QLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSI-------ASVATQNSAATHT 511
            +      ++D+  VI   ASAAQ Q  +  EV++++ +I       +S A Q ++A+  
Sbjct: 477 VISAAVSEINDLNLVI---ASAAQQQAHVAREVDRNLMNIRDLSAQSSSGAQQTASASRE 533

Query: 512 VEQLAMAMSGKVAEF 526
           +  LA+ ++  V  F
Sbjct: 534 LSTLALDLNNIVGRF 548