Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  144 bits (364), Expect = 6e-39
 Identities = 94/319 (29%), Positives = 171/319 (53%), Gaps = 9/319 (2%)

Query: 216 QQLKQWQNEYD-SISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQL 274
           Q+L+Q + + D ++S  ++   +   +A   L      ++ IL  + ++A  LG+ A++L
Sbjct: 222 QKLRQIREKSDMTVSFTVFRDDELGHIAK-DLNGVVNHLKGILKNIAEAASTLGDSADEL 280

Query: 275 HLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSI 334
           +  T++ +  +  Q S  +    A + + +A   V+  ++SA +      +  A     +
Sbjct: 281 NEFTRQANDRMFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIV 340

Query: 335 NVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAG 394
             +  ++  LA+Q +  A    +L+ ++Q +G+++  I  IAEQTNLLALNAAIEAARAG
Sbjct: 341 QQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAG 400

Query: 395 EQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDAN 454
           EQGRGFAVVADEVR L+ RT  +T++I++ I+++   +++    +     Q +   +  N
Sbjct: 401 EQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTN 460

Query: 455 TTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQN-------SA 507
                LQD+   +  + ++   +A+AA  Q  +   +NQ I +I+ +A ++       S 
Sbjct: 461 AAGSALQDIVASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSE 520

Query: 508 ATHTVEQLAMAMSGKVAEF 526
           A H + QLA  M  +V  F
Sbjct: 521 AVHQLAQLAGHMRTQVGTF 539